HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:42.8 nTPM
HPA Brain:23.4 nTPM
GTEx:42.8 nTPM
FANTOM5:9.1 Scaled Tags Per Million
Pig:3.2 nTPM
Mouse:3.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018843Antibody HPA019080Antibody HPA019092
Glial cells LowNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.4
1855 Male, age 76, left hemisphere 29.8
1898 Male, age 80, left hemisphere 23.9
1911 Female, age 85, right hemisphere 22.7
2529 Female, age 94, left hemisphere 22.3
2621 Female, age 67, right hemisphere 21.7
2148 Female, age 91, left hemisphere 20.3
Dentate gyrus
nTPM: 20.3
2010 Male, age 76, both hemispheres 30.8
2530 Female, age 94, left hemisphere 21.9
2528 Male, age 74, both hemispheres 18.8
1927 Female, age 91, both hemispheres 17.8
2246 Female, age 85, both hemispheres 16.9
2531 Female, age 67, both hemispheres 15.6
Entorhinal gyrus
nTPM: 19.4
2117 Female, age 91, right hemisphere 35.5
1787 Male, age 76, left hemisphere 23.5
1938 Female, age 85, left hemisphere 15.7
2764 Male, age 80, right hemisphere 15.1
2686 Male, age 75, right hemisphere 14.5
2613 Female, age 94, left hemisphere 11.8
Hippocampus, CA1
nTPM: 18.7
2045 Male, age 76, both hemispheres 23.2
2082 Female, age 91, right hemisphere 22.7
1873 Female, age 85, both hemispheres 20.1
2527 Male, age 74, both hemispheres 16.3
2749 Male, age 80, left hemisphere 11.3
Hippocampus, CA2
nTPM: 22.5
1940 Female, age 85, left hemisphere 35.4
2113 Female, age 91, right hemisphere 22.7
2437 Female, age 94, left hemisphere 22.2
2249 Male, age 74, both hemispheres 21.8
1963 Male, age 80, left hemisphere 17.4
1892 Male, age 76, both hemispheres 15.6
Hippocampus, CA3
nTPM: 16.1
1867 Male, age 76, both hemispheres 22.6
1891 Female, age 85, both hemispheres 17.1
2436 Male, age 74, both hemispheres 16.3
2861 Female, age 67, both hemispheres 15.3
2620 Female, age 94, left hemisphere 14.1
2137 Male, age 80, left hemisphere 11.0
Parahippocampal cortex
nTPM: 17.7
2018 Male, age 76, both hemispheres 28.2
2250 Female, age 67, right hemisphere 24.5
2693 Female, age 94, both hemispheres 19.8
2245 Female, age 91, both hemispheres 17.2
2622 Female, age 67, right hemisphere 16.7
2692 Male, age 74, both hemispheres 16.1
1990 Female, age 91, right hemisphere 14.9
1850 Male, age 80, both hemispheres 14.2
1933 Female, age 85, both hemispheres 13.1
2532 Female, age 72, left hemisphere 12.2
Perirhinal gyrus
nTPM: 15.6
2521 Female, age 94, right hemisphere 18.5
1847 Female, age 91, left hemisphere 17.1
2848 Male, age 76, right hemisphere 14.3
1794 Male, age 80, right hemisphere 14.2
1841 Female, age 85, right hemisphere 14.2
Subiculum
nTPM: 21.5
2042 Male, age 76, both hemispheres 33.7
2729 Female, age 91, right hemisphere 32.5
1901 Male, age 80, both hemispheres 18.8
2619 Male, age 74, both hemispheres 17.7
1977 Female, age 85, both hemispheres 13.3
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.8
Samples: 197

Max nTPM: 189.7
Min nTPM: 12.1
Std nTPM: 23.2
Median nTPM: 38.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 189.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 127.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 116.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 102.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 101.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 99.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 97.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 95.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 92.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 90.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 81.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.1
FF:10169-103B7 60 years, female 11.4
FF:10153-102I9 76 years, female 6.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.2
Pig sample Sample description nTPM
Subiculum
nTPM: 2.8
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 3.2
Sample C Male 2.9
Sample D Male 2.9
Dorsal hippocampus
nTPM: 2.8
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.4
Sample A Female 2.9
Sample B Female 3.1
Sample C Male 2.4
Sample D Male 2.9
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.2
Sample A Female 2.9
Sample B Female 2.5
Sample C Male 2.8
Sample D Male 2.2
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.6
Sample A Female 3.0
Sample B Female 3.4
Sample C Male 3.8
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.3
Sample A Male 3.0
Sample B Male 2.3
Sample C Female 3.2
Sample D Female 2.5
Hippocampal formation
nTPM: 3.4
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.5
Sample A Male 3.7
Sample B Male 2.5
Sample C Female 3.1
Sample D Female 4.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
67978490 Antisense, RP_040923_01_C06, Mouse strain C57BL/6J (56 days, male) 0.0

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