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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
122.4
nTPM
Monaco:
154.2
nTPM
Schmiedel:
63.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.4
HPA sample
nTPM
gdT-cell nTPM: 12.3
Samples: 6
Max nTPM: 20.4
Min nTPM: 6.1
P10809_1007
6.1
P10809_1022
11.9
P10809_1041
20.4
P10809_1060
9.3
P10809_1077
18.4
P10809_1098
7.4
MAIT T-cell nTPM: 39.3
Samples: 6
Max nTPM: 58.7
Min nTPM: 19.5
P10809_1006
19.5
P10809_1024
38.7
P10809_1043
29.3
P10809_1062
37.4
P10809_1083
58.7
P10809_1097
51.9
Memory CD4 T-cell nTPM: 108.2
Samples: 6
Max nTPM: 150.6
Min nTPM: 63.3
P10809_1014
63.3
P10809_1026
150.6
P10809_1045
123.1
P10809_1064
88.3
P10809_1086
80.2
P10809_1113
143.4
Memory CD8 T-cell nTPM: 41.2
Samples: 5
Max nTPM: 58.0
Min nTPM: 25.0
P10809_1012
50.8
P10809_1027
58.0
P10809_1046
26.7
P10809_1065
25.0
P10809_1111
45.3
Naive CD4 T-cell nTPM: 30.6
Samples: 6
Max nTPM: 57.9
Min nTPM: 8.1
P10809_1015
8.1
P10809_1030
30.5
P10809_1049
57.9
P10809_1068
21.5
P10809_1085
26.6
P10809_1112
38.8
Naive CD8 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 22.8
Min nTPM: 3.3
P10809_1016
3.3
P10809_1031
13.1
P10809_1050
22.8
P10809_1069
13.8
P10809_1087
13.4
P10809_1110
17.5
T-reg nTPM: 122.4
Samples: 6
Max nTPM: 203.8
Min nTPM: 69.6
P10809_1018
69.6
P10809_1037
115.9
P10809_1056
203.8
P10809_1075
136.6
P10809_1094
90.7
P10809_1106
117.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.3
Samples: 4
Max nTPM: 131.7
Min nTPM: 44.9
RHH5202_R3573
89.2
RHH5230_R3602
44.9
RHH5259_R3631
47.4
RHH5288_R3660
131.7
Effector memory CD8 T-cell nTPM: 27.0
Samples: 4
Max nTPM: 45.9
Min nTPM: 16.9
RHH5203_R3574
16.9
RHH5231_R3603
26.2
RHH5260_R3632
18.8
RHH5289_R3661
45.9
MAIT T-cell nTPM: 18.2
Samples: 4
Max nTPM: 27.3
Min nTPM: 9.3
RHH5233_R3605
16.6
RHH5205_R3576
19.5
RHH5262_R3634
9.3
RHH5297_R3663
27.3
Memory CD4 T-cell TFH nTPM: 54.4
Samples: 4
Max nTPM: 89.3
Min nTPM: 37.2
RHH5300_R3666
50.8
RHH5236_R3608
89.3
RHH5265_R3637
40.1
RHH5208_R3579
37.2
Memory CD4 T-cell Th1 nTPM: 54.2
Samples: 4
Max nTPM: 102.8
Min nTPM: 26.3
RHH5210_R3581
26.3
RHH5302_R3668
102.8
RHH5238_R3610
36.5
RHH5267_R3639
51.3
Memory CD4 T-cell Th1/Th17 nTPM: 85.0
Samples: 4
Max nTPM: 151.3
Min nTPM: 40.5
RHH5303_R3669
151.3
RHH5211_R3582
101.9
RHH5239_R3611
40.5
RHH5268_R3640
46.2
Memory CD4 T-cell Th17 nTPM: 134.0
Samples: 4
Max nTPM: 221.7
Min nTPM: 98.1
RHH5304_R3670
98.1
RHH5212_R3583
221.7
RHH5240_R3612
115.6
RHH5269_R3641
100.5
Memory CD4 T-cell Th2 nTPM: 154.2
Samples: 4
Max nTPM: 186.0
Min nTPM: 126.2
RHH5305_R3671
186.0
RHH5213_R3584
173.6
RHH5241_R3613
130.9
RHH5270_R3642
126.2
Naive CD4 T-cell nTPM: 17.7
Samples: 4
Max nTPM: 22.1
Min nTPM: 13.2
RHH5306_R3672
22.1
RHH5214_R3585
13.2
RHH5242_R3614
15.5
RHH5271_R3643
19.9
Naive CD8 T-cell nTPM: 4.2
Samples: 4
Max nTPM: 6.1
Min nTPM: 0.0
RHH5201_R3572
6.1
RHH5229_R3601
0.0
RHH5258_R3630
4.6
RHH5287_R3659
6.1
Non-Vd2 gdTCR nTPM: 15.2
Samples: 4
Max nTPM: 46.2
Min nTPM: 1.2
RHH5235_R3607
9.0
RHH5264_R3636
4.3
RHH5207_R3578
1.2
RHH5299_R3665
46.2
T-reg nTPM: 70.5
Samples: 4
Max nTPM: 90.3
Min nTPM: 43.4
RHH5301_R3667
90.3
RHH5237_R3609
86.0
RHH5266_R3638
43.4
RHH5209_R3580
62.2
Terminal effector memory CD4 T-cell nTPM: 10.4
Samples: 2
Max nTPM: 16.8
Min nTPM: 4.0
RHH5243_R3615
4.0
RHH5272_R3644
16.8
Terminal effector memory CD8 T-cell nTPM: 11.1
Samples: 4
Max nTPM: 14.6
Min nTPM: 4.5
RHH5232_R3604
12.7
RHH5204_R3575
12.4
RHH5261_R3633
4.5
RHH5296_R3662
14.6
Vd2 gdTCR nTPM: 17.5
Samples: 4
Max nTPM: 40.5
Min nTPM: 3.4
RHH5234_R3606
21.9
RHH5206_R3577
4.3
RHH5263_R3635
3.4
RHH5298_R3664
40.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
