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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
234.5
nTPM
Monaco:
51.6
nTPM
Schmiedel:
50.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
234.5
HPA sample
nTPM
gdT-cell nTPM: 174.8
Samples: 6
Max nTPM: 233.7
Min nTPM: 134.7
P10809_1007
134.7
P10809_1022
187.4
P10809_1041
233.7
P10809_1060
138.5
P10809_1077
176.4
P10809_1098
178.0
MAIT T-cell nTPM: 145.6
Samples: 6
Max nTPM: 188.3
Min nTPM: 98.8
P10809_1006
98.8
P10809_1024
143.6
P10809_1043
188.3
P10809_1062
165.1
P10809_1083
131.0
P10809_1097
146.5
Memory CD4 T-cell nTPM: 167.8
Samples: 6
Max nTPM: 201.3
Min nTPM: 114.4
P10809_1014
114.4
P10809_1026
196.2
P10809_1045
201.3
P10809_1064
169.3
P10809_1086
160.8
P10809_1113
164.9
Memory CD8 T-cell nTPM: 174.5
Samples: 5
Max nTPM: 206.2
Min nTPM: 125.6
P10809_1012
125.6
P10809_1027
176.5
P10809_1046
206.2
P10809_1065
187.2
P10809_1111
176.9
Naive CD4 T-cell nTPM: 153.6
Samples: 6
Max nTPM: 220.2
Min nTPM: 95.1
P10809_1015
95.1
P10809_1030
154.5
P10809_1049
220.2
P10809_1068
180.1
P10809_1085
111.7
P10809_1112
160.1
Naive CD8 T-cell nTPM: 156.7
Samples: 6
Max nTPM: 188.6
Min nTPM: 107.2
P10809_1016
107.2
P10809_1031
143.3
P10809_1050
174.1
P10809_1069
188.6
P10809_1087
174.5
P10809_1110
152.5
T-reg nTPM: 234.5
Samples: 6
Max nTPM: 268.5
Min nTPM: 166.8
P10809_1018
166.8
P10809_1037
240.8
P10809_1056
223.8
P10809_1075
251.5
P10809_1094
268.5
P10809_1106
255.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.3
Samples: 4
Max nTPM: 45.4
Min nTPM: 17.4
RHH5202_R3573
17.4
RHH5230_R3602
21.6
RHH5259_R3631
45.4
RHH5288_R3660
40.8
Effector memory CD8 T-cell nTPM: 29.3
Samples: 4
Max nTPM: 46.5
Min nTPM: 11.0
RHH5203_R3574
46.5
RHH5231_R3603
24.9
RHH5260_R3632
34.9
RHH5289_R3661
11.0
MAIT T-cell nTPM: 28.2
Samples: 4
Max nTPM: 39.1
Min nTPM: 18.6
RHH5233_R3605
18.6
RHH5205_R3576
21.7
RHH5262_R3634
33.3
RHH5297_R3663
39.1
Memory CD4 T-cell TFH nTPM: 41.3
Samples: 4
Max nTPM: 61.9
Min nTPM: 26.1
RHH5300_R3666
37.5
RHH5236_R3608
61.9
RHH5265_R3637
26.1
RHH5208_R3579
39.8
Memory CD4 T-cell Th1 nTPM: 45.2
Samples: 4
Max nTPM: 83.7
Min nTPM: 25.2
RHH5210_R3581
37.9
RHH5302_R3668
83.7
RHH5238_R3610
33.8
RHH5267_R3639
25.2
Memory CD4 T-cell Th1/Th17 nTPM: 29.7
Samples: 4
Max nTPM: 39.1
Min nTPM: 24.6
RHH5303_R3669
39.1
RHH5211_R3582
30.2
RHH5239_R3611
24.6
RHH5268_R3640
24.9
Memory CD4 T-cell Th17 nTPM: 29.1
Samples: 4
Max nTPM: 39.2
Min nTPM: 20.9
RHH5304_R3670
20.9
RHH5212_R3583
39.2
RHH5240_R3612
29.7
RHH5269_R3641
26.4
Memory CD4 T-cell Th2 nTPM: 33.5
Samples: 4
Max nTPM: 41.8
Min nTPM: 24.8
RHH5305_R3671
39.1
RHH5213_R3584
28.3
RHH5241_R3613
41.8
RHH5270_R3642
24.8
Naive CD4 T-cell nTPM: 35.8
Samples: 4
Max nTPM: 63.5
Min nTPM: 17.8
RHH5306_R3672
39.3
RHH5214_R3585
63.5
RHH5242_R3614
17.8
RHH5271_R3643
22.4
Naive CD8 T-cell nTPM: 26.5
Samples: 4
Max nTPM: 28.1
Min nTPM: 24.2
RHH5201_R3572
26.3
RHH5229_R3601
24.2
RHH5258_R3630
27.3
RHH5287_R3659
28.1
Non-Vd2 gdTCR nTPM: 31.4
Samples: 4
Max nTPM: 48.9
Min nTPM: 20.0
RHH5235_R3607
20.0
RHH5264_R3636
30.7
RHH5207_R3578
26.0
RHH5299_R3665
48.9
T-reg nTPM: 40.2
Samples: 4
Max nTPM: 69.8
Min nTPM: 23.9
RHH5301_R3667
69.8
RHH5237_R3609
43.1
RHH5266_R3638
23.9
RHH5209_R3580
23.9
Terminal effector memory CD4 T-cell nTPM: 34.4
Samples: 2
Max nTPM: 44.4
Min nTPM: 24.3
RHH5243_R3615
24.3
RHH5272_R3644
44.4
Terminal effector memory CD8 T-cell nTPM: 51.6
Samples: 4
Max nTPM: 102.5
Min nTPM: 21.5
RHH5232_R3604
21.5
RHH5204_R3575
102.5
RHH5261_R3633
43.4
RHH5296_R3662
38.8
Vd2 gdTCR nTPM: 48.7
Samples: 4
Max nTPM: 80.5
Min nTPM: 25.8
RHH5234_R3606
30.4
RHH5206_R3577
58.0
RHH5263_R3635
25.8
RHH5298_R3664
80.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
