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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.5
nTPM
Monaco:
199.7
nTPM
Schmiedel:
408.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.5
HPA sample
nTPM
gdT-cell nTPM: 40.5
Samples: 6
Max nTPM: 57.8
Min nTPM: 30.9
P10809_1007
50.3
P10809_1022
31.1
P10809_1041
57.8
P10809_1060
32.0
P10809_1077
30.9
P10809_1098
41.1
MAIT T-cell nTPM: 40.3
Samples: 6
Max nTPM: 48.7
Min nTPM: 34.0
P10809_1006
48.7
P10809_1024
38.8
P10809_1043
45.0
P10809_1062
34.0
P10809_1083
34.2
P10809_1097
41.1
Memory CD4 T-cell nTPM: 32.5
Samples: 6
Max nTPM: 41.7
Min nTPM: 24.3
P10809_1014
41.7
P10809_1026
24.3
P10809_1045
41.0
P10809_1064
28.1
P10809_1086
34.8
P10809_1113
25.2
Memory CD8 T-cell nTPM: 38.6
Samples: 5
Max nTPM: 48.9
Min nTPM: 27.0
P10809_1012
48.9
P10809_1027
27.0
P10809_1046
48.0
P10809_1065
31.7
P10809_1111
37.4
Naive CD4 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 41.6
Min nTPM: 19.7
P10809_1015
33.5
P10809_1030
19.7
P10809_1049
31.7
P10809_1068
25.3
P10809_1085
41.6
P10809_1112
27.5
Naive CD8 T-cell nTPM: 31.1
Samples: 6
Max nTPM: 39.0
Min nTPM: 21.0
P10809_1016
36.5
P10809_1031
21.0
P10809_1050
34.9
P10809_1069
27.8
P10809_1087
39.0
P10809_1110
27.1
T-reg nTPM: 39.9
Samples: 6
Max nTPM: 57.3
Min nTPM: 26.8
P10809_1018
57.3
P10809_1037
31.7
P10809_1056
49.8
P10809_1075
26.8
P10809_1094
46.4
P10809_1106
27.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 174.2
Samples: 4
Max nTPM: 193.2
Min nTPM: 160.3
RHH5202_R3573
193.2
RHH5230_R3602
182.3
RHH5259_R3631
160.3
RHH5288_R3660
161.0
Effector memory CD8 T-cell nTPM: 199.8
Samples: 4
Max nTPM: 232.0
Min nTPM: 160.8
RHH5203_R3574
199.0
RHH5231_R3603
207.2
RHH5260_R3632
232.0
RHH5289_R3661
160.8
MAIT T-cell nTPM: 188.0
Samples: 4
Max nTPM: 208.5
Min nTPM: 165.1
RHH5233_R3605
195.2
RHH5205_R3576
208.5
RHH5262_R3634
183.1
RHH5297_R3663
165.1
Memory CD4 T-cell TFH nTPM: 163.3
Samples: 4
Max nTPM: 203.3
Min nTPM: 132.7
RHH5300_R3666
132.7
RHH5236_R3608
153.9
RHH5265_R3637
163.2
RHH5208_R3579
203.3
Memory CD4 T-cell Th1 nTPM: 144.5
Samples: 4
Max nTPM: 164.9
Min nTPM: 126.9
RHH5210_R3581
126.9
RHH5302_R3668
135.3
RHH5238_R3610
164.9
RHH5267_R3639
151.0
Memory CD4 T-cell Th1/Th17 nTPM: 171.0
Samples: 4
Max nTPM: 196.2
Min nTPM: 143.8
RHH5303_R3669
163.7
RHH5211_R3582
196.2
RHH5239_R3611
143.8
RHH5268_R3640
180.1
Memory CD4 T-cell Th17 nTPM: 169.8
Samples: 4
Max nTPM: 212.4
Min nTPM: 143.9
RHH5304_R3670
171.7
RHH5212_R3583
151.2
RHH5240_R3612
212.4
RHH5269_R3641
143.9
Memory CD4 T-cell Th2 nTPM: 135.0
Samples: 4
Max nTPM: 155.0
Min nTPM: 110.7
RHH5305_R3671
110.7
RHH5213_R3584
155.0
RHH5241_R3613
122.0
RHH5270_R3642
152.4
Naive CD4 T-cell nTPM: 134.6
Samples: 4
Max nTPM: 152.8
Min nTPM: 115.5
RHH5306_R3672
130.5
RHH5214_R3585
115.5
RHH5242_R3614
139.6
RHH5271_R3643
152.8
Naive CD8 T-cell nTPM: 156.5
Samples: 4
Max nTPM: 171.7
Min nTPM: 138.2
RHH5201_R3572
169.8
RHH5229_R3601
171.7
RHH5258_R3630
146.4
RHH5287_R3659
138.2
Non-Vd2 gdTCR nTPM: 165.6
Samples: 4
Max nTPM: 191.1
Min nTPM: 147.4
RHH5235_R3607
157.2
RHH5264_R3636
191.1
RHH5207_R3578
166.7
RHH5299_R3665
147.4
T-reg nTPM: 151.6
Samples: 4
Max nTPM: 160.3
Min nTPM: 135.9
RHH5301_R3667
135.9
RHH5237_R3609
160.3
RHH5266_R3638
160.2
RHH5209_R3580
149.8
Terminal effector memory CD4 T-cell nTPM: 174.9
Samples: 2
Max nTPM: 178.0
Min nTPM: 171.7
RHH5243_R3615
178.0
RHH5272_R3644
171.7
Terminal effector memory CD8 T-cell nTPM: 172.5
Samples: 4
Max nTPM: 199.8
Min nTPM: 156.9
RHH5232_R3604
156.9
RHH5204_R3575
160.3
RHH5261_R3633
199.8
RHH5296_R3662
173.1
Vd2 gdTCR nTPM: 192.2
Samples: 4
Max nTPM: 231.6
Min nTPM: 156.0
RHH5234_R3606
175.9
RHH5206_R3577
205.4
RHH5263_R3635
231.6
RHH5298_R3664
156.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
