HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:95.1 nTPM
HPA Brain:102.5 nTPM
GTEx:95.1 nTPM
FANTOM5:151.2 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:42.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046119Antibody HPA063535Antibody CAB021089
Glial cells Not detectedNot detectedLow
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.5
Sample id Sample description nTPM
Hippocampus
nTPM: 85.4
2529 Female, age 94, left hemisphere 99.4
1911 Female, age 85, right hemisphere 96.3
2621 Female, age 67, right hemisphere 83.0
1898 Male, age 80, left hemisphere 82.4
1855 Male, age 76, left hemisphere 80.5
2148 Female, age 91, left hemisphere 70.5
Dentate gyrus
nTPM: 83.2
2528 Male, age 74, both hemispheres 95.4
2530 Female, age 94, left hemisphere 93.8
2010 Male, age 76, both hemispheres 92.8
2246 Female, age 85, both hemispheres 80.6
2531 Female, age 67, both hemispheres 74.8
1927 Female, age 91, both hemispheres 61.6
Entorhinal gyrus
nTPM: 87.6
2117 Female, age 91, right hemisphere 113.4
2686 Male, age 75, right hemisphere 89.0
1938 Female, age 85, left hemisphere 87.6
1787 Male, age 76, left hemisphere 82.3
2613 Female, age 94, left hemisphere 79.1
2764 Male, age 80, right hemisphere 74.4
Hippocampus, CA1
nTPM: 79.0
2527 Male, age 74, both hemispheres 96.0
2082 Female, age 91, right hemisphere 87.3
1873 Female, age 85, both hemispheres 78.3
2045 Male, age 76, both hemispheres 69.2
2749 Male, age 80, left hemisphere 64.4
Hippocampus, CA2
nTPM: 88.2
2249 Male, age 74, both hemispheres 113.6
1940 Female, age 85, left hemisphere 89.4
2113 Female, age 91, right hemisphere 88.6
2437 Female, age 94, left hemisphere 87.1
1963 Male, age 80, left hemisphere 86.5
1892 Male, age 76, both hemispheres 63.8
Hippocampus, CA3
nTPM: 78.7
1891 Female, age 85, both hemispheres 107.5
2436 Male, age 74, both hemispheres 101.5
1867 Male, age 76, both hemispheres 80.3
2137 Male, age 80, left hemisphere 65.7
2861 Female, age 67, both hemispheres 60.8
2620 Female, age 94, left hemisphere 56.0
Parahippocampal cortex
nTPM: 82.8
1990 Female, age 91, right hemisphere 91.8
2692 Male, age 74, both hemispheres 91.5
2018 Male, age 76, both hemispheres 90.0
2532 Female, age 72, left hemisphere 89.1
2250 Female, age 67, right hemisphere 84.7
1933 Female, age 85, both hemispheres 83.3
1850 Male, age 80, both hemispheres 81.8
2245 Female, age 91, both hemispheres 77.5
2622 Female, age 67, right hemisphere 69.8
2693 Female, age 94, both hemispheres 68.0
Perirhinal gyrus
nTPM: 77.2
1794 Male, age 80, right hemisphere 81.6
2521 Female, age 94, right hemisphere 81.1
1841 Female, age 85, right hemisphere 78.0
2848 Male, age 76, right hemisphere 72.8
1847 Female, age 91, left hemisphere 72.4
Subiculum
nTPM: 102.5
2438 Female, age 94, left hemisphere 112.6
2042 Male, age 76, both hemispheres 112.1
1901 Male, age 80, both hemispheres 105.2
1977 Female, age 85, both hemispheres 104.6
2619 Male, age 74, both hemispheres 90.6
2729 Female, age 91, right hemisphere 90.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.1
Samples: 197

Max nTPM: 201.3
Min nTPM: 39.3
Std nTPM: 30.6
Median nTPM: 91.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 201.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 191.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 177.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 170.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 166.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 160.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 160.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 154.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 153.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 149.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 149.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.2
FF:10153-102I9 76 years, female 164.3
FF:10169-103B7 60 years, female 138.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.1
Pig sample Sample description nTPM
Subiculum
nTPM: 36.8
Samples: 4

Max nTPM: 40.0
Min nTPM: 34.6
Sample A Female 40.0
Sample B Female 35.3
Sample C Male 34.6
Sample D Male 37.2
Dorsal hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 54.6
Min nTPM: 26.6
Sample A Female 54.6
Sample B Female 33.8
Sample C Male 49.6
Sample D Male 26.6
Entorhinal cortex
nTPM: 31.0
Samples: 4

Max nTPM: 35.4
Min nTPM: 23.7
Sample A Female 34.0
Sample B Female 35.4
Sample C Male 31.0
Sample D Male 23.7
Ventral hippocampus
nTPM: 37.9
Samples: 4

Max nTPM: 46.1
Min nTPM: 31.3
Sample A Female 41.5
Sample B Female 31.3
Sample C Male 46.1
Sample D Male 32.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 46.3
Min nTPM: 38.1
Sample A Male 46.3
Sample B Male 43.5
Sample C Female 41.2
Sample D Female 38.1
Hippocampal formation
nTPM: 41.2
Samples: 4

Max nTPM: 47.3
Min nTPM: 34.4
Sample A Male 34.4
Sample B Male 39.8
Sample C Female 43.4
Sample D Female 47.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
77455062 Antisense, RP_070129_02_A10, Mouse strain C57BL/6J (56 days, male) 0.5

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