HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:67.6 nTPM
HPA Brain:105.1 nTPM
GTEx:67.6 nTPM
FANTOM5:190.9 Scaled Tags Per Million
Pig:123.6 nTPM
Mouse:207.2 nTPM
Allen mouse:19.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038845Antibody HPA038846Antibody CAB005221
Glial cells MediumNot detectedLow
Neuronal cells HighHighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.1
Sample id Sample description nTPM
Hippocampus
nTPM: 88.9
1898 Male, age 80, left hemisphere 114.4
2529 Female, age 94, left hemisphere 106.3
2621 Female, age 67, right hemisphere 89.5
2148 Female, age 91, left hemisphere 81.7
1911 Female, age 85, right hemisphere 74.5
1855 Male, age 76, left hemisphere 67.3
Dentate gyrus
nTPM: 86.9
2010 Male, age 76, both hemispheres 142.3
2528 Male, age 74, both hemispheres 84.0
1927 Female, age 91, both hemispheres 81.7
2246 Female, age 85, both hemispheres 78.9
2530 Female, age 94, left hemisphere 75.1
2531 Female, age 67, both hemispheres 59.7
Entorhinal gyrus
nTPM: 69.0
1938 Female, age 85, left hemisphere 100.5
2117 Female, age 91, right hemisphere 94.8
1787 Male, age 76, left hemisphere 78.7
2764 Male, age 80, right hemisphere 65.0
2613 Female, age 94, left hemisphere 38.4
2686 Male, age 75, right hemisphere 36.5
Hippocampus, CA1
nTPM: 105.1
2527 Male, age 74, both hemispheres 143.2
2045 Male, age 76, both hemispheres 116.0
1873 Female, age 85, both hemispheres 97.8
2749 Male, age 80, left hemisphere 93.0
2082 Female, age 91, right hemisphere 75.3
Hippocampus, CA2
nTPM: 98.7
2249 Male, age 74, both hemispheres 213.2
1963 Male, age 80, left hemisphere 85.9
1892 Male, age 76, both hemispheres 82.5
1940 Female, age 85, left hemisphere 74.8
2113 Female, age 91, right hemisphere 73.8
2437 Female, age 94, left hemisphere 61.9
Hippocampus, CA3
nTPM: 95.3
2436 Male, age 74, both hemispheres 188.5
1867 Male, age 76, both hemispheres 113.8
1891 Female, age 85, both hemispheres 78.0
2620 Female, age 94, left hemisphere 77.4
2137 Male, age 80, left hemisphere 64.6
2861 Female, age 67, both hemispheres 49.4
Parahippocampal cortex
nTPM: 70.0
2018 Male, age 76, both hemispheres 114.6
2250 Female, age 67, right hemisphere 93.0
1933 Female, age 85, both hemispheres 92.0
1990 Female, age 91, right hemisphere 80.3
2245 Female, age 91, both hemispheres 78.1
1850 Male, age 80, both hemispheres 69.7
2532 Female, age 72, left hemisphere 66.7
2693 Female, age 94, both hemispheres 46.8
2622 Female, age 67, right hemisphere 39.4
2692 Male, age 74, both hemispheres 19.5
Perirhinal gyrus
nTPM: 79.6
1841 Female, age 85, right hemisphere 101.2
1847 Female, age 91, left hemisphere 94.5
2521 Female, age 94, right hemisphere 81.9
1794 Male, age 80, right hemisphere 66.0
2848 Male, age 76, right hemisphere 54.5
Subiculum
nTPM: 83.8
2042 Male, age 76, both hemispheres 129.6
1977 Female, age 85, both hemispheres 94.4
1901 Male, age 80, both hemispheres 74.9
2729 Female, age 91, right hemisphere 72.5
2438 Female, age 94, left hemisphere 71.6
2619 Male, age 74, both hemispheres 59.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.6
Samples: 197

Max nTPM: 377.0
Min nTPM: 25.1
Std nTPM: 40.7
Median nTPM: 56.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 377.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 297.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 192.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 189.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 179.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 177.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 173.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 170.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 149.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 133.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 129.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 190.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 190.9
FF:10153-102I9 76 years, female 268.7
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.6
Pig sample Sample description nTPM
Subiculum
nTPM: 121.6
Samples: 4

Max nTPM: 155.3
Min nTPM: 103.9
Sample A Female 155.3
Sample B Female 112.2
Sample C Male 103.9
Sample D Male 114.9
Dorsal hippocampus
nTPM: 122.5
Samples: 4

Max nTPM: 149.7
Min nTPM: 111.7
Sample A Female 149.7
Sample B Female 116.9
Sample C Male 111.7
Sample D Male 111.7
Entorhinal cortex
nTPM: 123.6
Samples: 4

Max nTPM: 139.4
Min nTPM: 110.7
Sample A Female 130.7
Sample B Female 139.4
Sample C Male 113.6
Sample D Male 110.7
Ventral hippocampus
nTPM: 115.4
Samples: 4

Max nTPM: 126.9
Min nTPM: 89.2
Sample A Female 123.0
Sample B Female 89.2
Sample C Male 122.4
Sample D Male 126.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 207.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 207.2
Samples: 4

Max nTPM: 237.3
Min nTPM: 163.8
Sample A Male 163.8
Sample B Male 192.1
Sample C Female 235.6
Sample D Female 237.3
Hippocampal formation
nTPM: 207.0
Samples: 4

Max nTPM: 253.7
Min nTPM: 171.0
Sample A Male 171.0
Sample B Male 171.5
Sample C Female 231.9
Sample D Female 253.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.2
69735138 Antisense, RP_050503_02_B08, Mouse strain C57BL/6J (56 days, male) 19.2

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