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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
390.7
nTPM
Monaco:
698.0
nTPM
Schmiedel:
1829.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
390.7
HPA sample
nTPM
gdT-cell nTPM: 385.6
Samples: 6
Max nTPM: 523.5
Min nTPM: 262.1
P10809_1007
262.1
P10809_1022
523.5
P10809_1041
500.5
P10809_1060
300.4
P10809_1077
369.8
P10809_1098
357.0
MAIT T-cell nTPM: 390.7
Samples: 6
Max nTPM: 511.3
Min nTPM: 285.0
P10809_1006
285.0
P10809_1024
511.3
P10809_1043
465.1
P10809_1062
379.1
P10809_1083
300.8
P10809_1097
402.7
Memory CD4 T-cell nTPM: 277.4
Samples: 6
Max nTPM: 329.1
Min nTPM: 197.9
P10809_1014
197.9
P10809_1026
283.9
P10809_1045
326.3
P10809_1064
232.8
P10809_1086
329.1
P10809_1113
294.6
Memory CD8 T-cell nTPM: 360.2
Samples: 5
Max nTPM: 450.2
Min nTPM: 275.7
P10809_1012
275.7
P10809_1027
386.5
P10809_1046
450.2
P10809_1065
330.6
P10809_1111
358.1
Naive CD4 T-cell nTPM: 225.3
Samples: 6
Max nTPM: 271.7
Min nTPM: 148.2
P10809_1015
148.2
P10809_1030
220.5
P10809_1049
256.4
P10809_1068
213.0
P10809_1085
271.7
P10809_1112
242.1
Naive CD8 T-cell nTPM: 278.0
Samples: 6
Max nTPM: 389.0
Min nTPM: 131.3
P10809_1016
131.3
P10809_1031
300.6
P10809_1050
306.2
P10809_1069
293.3
P10809_1087
389.0
P10809_1110
247.6
T-reg nTPM: 214.2
Samples: 6
Max nTPM: 257.3
Min nTPM: 164.9
P10809_1018
164.9
P10809_1037
257.3
P10809_1056
250.7
P10809_1075
174.7
P10809_1094
193.2
P10809_1106
244.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
698.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 343.0
Samples: 4
Max nTPM: 518.2
Min nTPM: 268.7
RHH5202_R3573
518.2
RHH5230_R3602
272.3
RHH5259_R3631
312.9
RHH5288_R3660
268.7
Effector memory CD8 T-cell nTPM: 591.2
Samples: 4
Max nTPM: 783.7
Min nTPM: 462.5
RHH5203_R3574
783.7
RHH5231_R3603
462.5
RHH5260_R3632
545.9
RHH5289_R3661
572.7
MAIT T-cell nTPM: 698.0
Samples: 4
Max nTPM: 1467.3
Min nTPM: 336.6
RHH5233_R3605
494.1
RHH5205_R3576
1467.3
RHH5262_R3634
494.0
RHH5297_R3663
336.6
Memory CD4 T-cell TFH nTPM: 307.8
Samples: 4
Max nTPM: 454.2
Min nTPM: 215.6
RHH5300_R3666
215.6
RHH5236_R3608
324.6
RHH5265_R3637
236.9
RHH5208_R3579
454.2
Memory CD4 T-cell Th1 nTPM: 338.2
Samples: 4
Max nTPM: 442.3
Min nTPM: 243.4
RHH5210_R3581
442.3
RHH5302_R3668
243.4
RHH5238_R3610
327.8
RHH5267_R3639
339.2
Memory CD4 T-cell Th1/Th17 nTPM: 451.3
Samples: 4
Max nTPM: 682.2
Min nTPM: 348.8
RHH5303_R3669
365.5
RHH5211_R3582
682.2
RHH5239_R3611
408.6
RHH5268_R3640
348.8
Memory CD4 T-cell Th17 nTPM: 474.1
Samples: 4
Max nTPM: 684.5
Min nTPM: 346.3
RHH5304_R3670
364.0
RHH5212_R3583
684.5
RHH5240_R3612
501.6
RHH5269_R3641
346.3
Memory CD4 T-cell Th2 nTPM: 478.3
Samples: 4
Max nTPM: 936.4
Min nTPM: 306.5
RHH5305_R3671
306.5
RHH5213_R3584
936.4
RHH5241_R3613
328.5
RHH5270_R3642
341.8
Naive CD4 T-cell nTPM: 274.9
Samples: 4
Max nTPM: 393.9
Min nTPM: 219.3
RHH5306_R3672
233.0
RHH5214_R3585
393.9
RHH5242_R3614
219.3
RHH5271_R3643
253.4
Naive CD8 T-cell nTPM: 241.2
Samples: 4
Max nTPM: 362.3
Min nTPM: 172.1
RHH5201_R3572
362.3
RHH5229_R3601
203.4
RHH5258_R3630
172.1
RHH5287_R3659
227.1
Non-Vd2 gdTCR nTPM: 597.9
Samples: 4
Max nTPM: 818.0
Min nTPM: 424.6
RHH5235_R3607
634.4
RHH5264_R3636
514.6
RHH5207_R3578
818.0
RHH5299_R3665
424.6
T-reg nTPM: 347.9
Samples: 4
Max nTPM: 462.9
Min nTPM: 218.5
RHH5301_R3667
218.5
RHH5237_R3609
401.3
RHH5266_R3638
308.9
RHH5209_R3580
462.9
Terminal effector memory CD4 T-cell nTPM: 453.0
Samples: 2
Max nTPM: 541.4
Min nTPM: 364.5
RHH5243_R3615
541.4
RHH5272_R3644
364.5
Terminal effector memory CD8 T-cell nTPM: 574.4
Samples: 4
Max nTPM: 666.2
Min nTPM: 483.7
RHH5232_R3604
564.1
RHH5204_R3575
666.2
RHH5261_R3633
583.4
RHH5296_R3662
483.7
Vd2 gdTCR nTPM: 522.5
Samples: 4
Max nTPM: 814.8
Min nTPM: 287.0
RHH5234_R3606
479.7
RHH5206_R3577
814.8
RHH5263_R3635
508.6
RHH5298_R3664
287.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.