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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.3
nTPM
Monaco:
180.4
nTPM
Schmiedel:
184.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.3
HPA sample
nTPM
gdT-cell nTPM: 44.0
Samples: 6
Max nTPM: 66.9
Min nTPM: 25.5
P10809_1007
39.5
P10809_1022
42.9
P10809_1041
37.0
P10809_1060
66.9
P10809_1077
52.0
P10809_1098
25.5
MAIT T-cell nTPM: 37.8
Samples: 6
Max nTPM: 59.8
Min nTPM: 20.9
P10809_1006
20.9
P10809_1024
37.5
P10809_1043
28.5
P10809_1062
59.8
P10809_1083
52.2
P10809_1097
27.9
Memory CD4 T-cell nTPM: 38.7
Samples: 6
Max nTPM: 54.9
Min nTPM: 29.3
P10809_1014
29.3
P10809_1026
36.5
P10809_1045
35.8
P10809_1064
54.9
P10809_1086
42.7
P10809_1113
33.1
Memory CD8 T-cell nTPM: 36.8
Samples: 5
Max nTPM: 46.6
Min nTPM: 26.5
P10809_1012
27.0
P10809_1027
46.6
P10809_1046
38.9
P10809_1065
44.9
P10809_1111
26.5
Naive CD4 T-cell nTPM: 47.5
Samples: 6
Max nTPM: 65.8
Min nTPM: 32.3
P10809_1015
32.6
P10809_1030
53.8
P10809_1049
65.8
P10809_1068
64.4
P10809_1085
36.0
P10809_1112
32.3
Naive CD8 T-cell nTPM: 32.9
Samples: 6
Max nTPM: 37.8
Min nTPM: 27.8
P10809_1016
32.7
P10809_1031
37.8
P10809_1050
30.4
P10809_1069
37.0
P10809_1087
31.9
P10809_1110
27.8
T-reg nTPM: 49.3
Samples: 6
Max nTPM: 76.4
Min nTPM: 28.1
P10809_1018
30.2
P10809_1037
36.7
P10809_1056
64.1
P10809_1075
76.4
P10809_1094
60.3
P10809_1106
28.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
180.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.2
Samples: 4
Max nTPM: 185.5
Min nTPM: 120.5
RHH5202_R3573
138.0
RHH5230_R3602
185.5
RHH5259_R3631
136.9
RHH5288_R3660
120.5
Effector memory CD8 T-cell nTPM: 129.2
Samples: 4
Max nTPM: 147.8
Min nTPM: 108.0
RHH5203_R3574
137.4
RHH5231_R3603
108.0
RHH5260_R3632
123.6
RHH5289_R3661
147.8
MAIT T-cell nTPM: 117.9
Samples: 4
Max nTPM: 152.8
Min nTPM: 91.4
RHH5233_R3605
152.8
RHH5205_R3576
107.9
RHH5262_R3634
91.4
RHH5297_R3663
119.3
Memory CD4 T-cell TFH nTPM: 180.4
Samples: 4
Max nTPM: 205.1
Min nTPM: 156.7
RHH5300_R3666
156.7
RHH5236_R3608
205.1
RHH5265_R3637
165.3
RHH5208_R3579
194.6
Memory CD4 T-cell Th1 nTPM: 136.2
Samples: 4
Max nTPM: 173.0
Min nTPM: 119.2
RHH5210_R3581
126.4
RHH5302_R3668
126.2
RHH5238_R3610
173.0
RHH5267_R3639
119.2
Memory CD4 T-cell Th1/Th17 nTPM: 130.9
Samples: 4
Max nTPM: 152.4
Min nTPM: 113.8
RHH5303_R3669
135.1
RHH5211_R3582
122.2
RHH5239_R3611
152.4
RHH5268_R3640
113.8
Memory CD4 T-cell Th17 nTPM: 132.8
Samples: 4
Max nTPM: 148.7
Min nTPM: 124.1
RHH5304_R3670
133.5
RHH5212_R3583
124.1
RHH5240_R3612
148.7
RHH5269_R3641
124.9
Memory CD4 T-cell Th2 nTPM: 133.9
Samples: 4
Max nTPM: 164.3
Min nTPM: 120.1
RHH5305_R3671
120.5
RHH5213_R3584
130.6
RHH5241_R3613
164.3
RHH5270_R3642
120.1
Naive CD4 T-cell nTPM: 126.6
Samples: 4
Max nTPM: 136.5
Min nTPM: 114.9
RHH5306_R3672
124.8
RHH5214_R3585
130.2
RHH5242_R3614
136.5
RHH5271_R3643
114.9
Naive CD8 T-cell nTPM: 127.6
Samples: 4
Max nTPM: 144.0
Min nTPM: 120.5
RHH5201_R3572
120.5
RHH5229_R3601
121.7
RHH5258_R3630
124.1
RHH5287_R3659
144.0
Non-Vd2 gdTCR nTPM: 133.2
Samples: 4
Max nTPM: 171.4
Min nTPM: 115.3
RHH5235_R3607
171.4
RHH5264_R3636
127.0
RHH5207_R3578
119.0
RHH5299_R3665
115.3
T-reg nTPM: 153.2
Samples: 4
Max nTPM: 193.8
Min nTPM: 121.7
RHH5301_R3667
132.4
RHH5237_R3609
193.8
RHH5266_R3638
121.7
RHH5209_R3580
164.9
Terminal effector memory CD4 T-cell nTPM: 137.3
Samples: 2
Max nTPM: 144.2
Min nTPM: 130.3
RHH5243_R3615
144.2
RHH5272_R3644
130.3
Terminal effector memory CD8 T-cell nTPM: 123.1
Samples: 4
Max nTPM: 154.8
Min nTPM: 109.9
RHH5232_R3604
154.8
RHH5204_R3575
115.2
RHH5261_R3633
109.9
RHH5296_R3662
112.3
Vd2 gdTCR nTPM: 112.1
Samples: 4
Max nTPM: 120.3
Min nTPM: 106.2
RHH5234_R3606
106.6
RHH5206_R3577
120.3
RHH5263_R3635
115.1
RHH5298_R3664
106.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
