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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.1
nTPM
Monaco:
160.2
nTPM
Schmiedel:
115.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.1
HPA sample
nTPM
gdT-cell nTPM: 14.4
Samples: 6
Max nTPM: 24.2
Min nTPM: 7.8
P10809_1007
19.6
P10809_1022
12.7
P10809_1041
13.1
P10809_1060
7.8
P10809_1077
24.2
P10809_1098
9.0
MAIT T-cell nTPM: 15.0
Samples: 6
Max nTPM: 23.7
Min nTPM: 8.1
P10809_1006
23.7
P10809_1024
8.1
P10809_1043
14.5
P10809_1062
15.2
P10809_1083
19.2
P10809_1097
9.5
Memory CD4 T-cell nTPM: 10.8
Samples: 6
Max nTPM: 14.5
Min nTPM: 6.9
P10809_1014
14.5
P10809_1026
8.1
P10809_1045
9.5
P10809_1064
12.7
P10809_1086
12.9
P10809_1113
6.9
Memory CD8 T-cell nTPM: 14.8
Samples: 5
Max nTPM: 17.8
Min nTPM: 9.8
P10809_1012
17.7
P10809_1027
14.7
P10809_1046
13.8
P10809_1065
17.8
P10809_1111
9.8
Naive CD4 T-cell nTPM: 17.5
Samples: 6
Max nTPM: 25.7
Min nTPM: 11.1
P10809_1015
25.7
P10809_1030
19.2
P10809_1049
12.1
P10809_1068
23.1
P10809_1085
11.1
P10809_1112
13.6
Naive CD8 T-cell nTPM: 19.1
Samples: 6
Max nTPM: 27.7
Min nTPM: 9.4
P10809_1016
27.7
P10809_1031
23.4
P10809_1050
13.4
P10809_1069
24.2
P10809_1087
9.4
P10809_1110
16.3
T-reg nTPM: 17.1
Samples: 6
Max nTPM: 21.9
Min nTPM: 12.2
P10809_1018
15.0
P10809_1037
16.7
P10809_1056
21.9
P10809_1075
20.9
P10809_1094
12.2
P10809_1106
15.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.9
Samples: 4
Max nTPM: 133.8
Min nTPM: 64.1
RHH5202_R3573
64.1
RHH5230_R3602
133.8
RHH5259_R3631
132.5
RHH5288_R3660
101.0
Effector memory CD8 T-cell nTPM: 97.5
Samples: 4
Max nTPM: 133.8
Min nTPM: 69.3
RHH5203_R3574
133.8
RHH5231_R3603
91.9
RHH5260_R3632
95.0
RHH5289_R3661
69.3
MAIT T-cell nTPM: 138.6
Samples: 4
Max nTPM: 180.2
Min nTPM: 118.0
RHH5233_R3605
124.9
RHH5205_R3576
180.2
RHH5262_R3634
131.4
RHH5297_R3663
118.0
Memory CD4 T-cell TFH nTPM: 88.3
Samples: 4
Max nTPM: 119.4
Min nTPM: 31.8
RHH5300_R3666
119.4
RHH5236_R3608
91.5
RHH5265_R3637
110.3
RHH5208_R3579
31.8
Memory CD4 T-cell Th1 nTPM: 118.6
Samples: 4
Max nTPM: 146.7
Min nTPM: 78.9
RHH5210_R3581
116.2
RHH5302_R3668
78.9
RHH5238_R3610
146.7
RHH5267_R3639
132.7
Memory CD4 T-cell Th1/Th17 nTPM: 103.3
Samples: 4
Max nTPM: 134.4
Min nTPM: 28.2
RHH5303_R3669
28.2
RHH5211_R3582
134.4
RHH5239_R3611
125.4
RHH5268_R3640
125.0
Memory CD4 T-cell Th17 nTPM: 94.0
Samples: 4
Max nTPM: 140.1
Min nTPM: 60.5
RHH5304_R3670
60.5
RHH5212_R3583
112.3
RHH5240_R3612
63.2
RHH5269_R3641
140.1
Memory CD4 T-cell Th2 nTPM: 111.3
Samples: 4
Max nTPM: 138.9
Min nTPM: 72.6
RHH5305_R3671
110.2
RHH5213_R3584
138.9
RHH5241_R3613
72.6
RHH5270_R3642
123.4
Naive CD4 T-cell nTPM: 149.1
Samples: 4
Max nTPM: 175.1
Min nTPM: 131.9
RHH5306_R3672
138.6
RHH5214_R3585
131.9
RHH5242_R3614
175.1
RHH5271_R3643
150.8
Naive CD8 T-cell nTPM: 131.7
Samples: 4
Max nTPM: 171.0
Min nTPM: 52.2
RHH5201_R3572
52.2
RHH5229_R3601
171.0
RHH5258_R3630
146.5
RHH5287_R3659
156.9
Non-Vd2 gdTCR nTPM: 123.7
Samples: 4
Max nTPM: 207.1
Min nTPM: 60.4
RHH5235_R3607
207.1
RHH5264_R3636
60.4
RHH5207_R3578
86.9
RHH5299_R3665
140.2
T-reg nTPM: 128.9
Samples: 4
Max nTPM: 156.9
Min nTPM: 105.3
RHH5301_R3667
115.6
RHH5237_R3609
105.3
RHH5266_R3638
156.9
RHH5209_R3580
137.9
Terminal effector memory CD4 T-cell nTPM: 160.2
Samples: 2
Max nTPM: 183.1
Min nTPM: 137.3
RHH5243_R3615
183.1
RHH5272_R3644
137.3
Terminal effector memory CD8 T-cell nTPM: 114.8
Samples: 4
Max nTPM: 175.1
Min nTPM: 66.4
RHH5232_R3604
101.6
RHH5204_R3575
175.1
RHH5261_R3633
116.2
RHH5296_R3662
66.4
Vd2 gdTCR nTPM: 116.6
Samples: 4
Max nTPM: 152.6
Min nTPM: 70.5
RHH5234_R3606
152.6
RHH5206_R3577
114.8
RHH5263_R3635
70.5
RHH5298_R3664
128.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
