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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
104.5
nTPM
FANTOM5:
27.6
Scaled Tags Per Million
Allen mouse:
1.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
104.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 92.2
2188
Female, age 91, both hemispheres
113.1
2301
Female, age 85, both hemispheres
109.6
2090
Male, age 80, both hemispheres
98.2
1984
Male, age 76, both hemispheres
48.1
Dorsal cochlear nucleus nTPM: 80.6
2378
Male, age 80, both hemispheres
88.6
2370
Male, age 61, both hemispheres
85.8
2802
Male, age 74, right hemisphere
82.3
2187
Female, age 91, both hemispheres
76.9
2058
Male, age 76, both hemispheres
69.4
Dorsal tegmental nucleus nTPM: 77.2
2083
Male, age 80, both hemispheres
101.3
2326
Male, age 74, both hemispheres
80.3
1936
Male, age 76, left hemisphere
71.0
2358
Male, age 61, both hemispheres
56.3
Dorsolateral tegmental area nTPM: 75.9
2654
Male, age 80, both hemispheres
101.7
2751
Female, age 85, both hemispheres
99.9
2337
Male, age 61, both hemispheres
78.4
2360
Male, age 74, both hemispheres
53.1
2141
Male, age 76, both hemispheres
46.5
Kolliker-Fuse nucleus nTPM: 85.6
2793
Female, age 91, left hemisphere
118.2
2163
Male, age 80, both hemispheres
83.5
2315
Male, age 76, right hemisphere
55.1
Lateral lemniscal nuclei nTPM: 77.4
2320
Female, age 91, left hemisphere
103.3
2453
Male, age 74, right hemisphere
82.5
2746
Female, age 85, left hemisphere
80.7
2169
Male, age 76, both hemispheres
64.0
2036
Male, age 80, both hemispheres
56.3
Lateral parabrachial nucleus nTPM: 83.0
2792
Male, age 76, both hemispheres
134.9
2013
Male, age 80, both hemispheres
89.3
2139
Female, age 85, right hemisphere
64.2
2790
Male, age 61, both hemispheres
43.6
Lateral vestibular nucleus nTPM: 90.7
2311
Male, age 80, both hemispheres
92.1
2184
Male, age 76, both hemispheres
89.3
Locus coeruleus nTPM: 42.8
2162
Male, age 80, both hemispheres
53.5
2720
Male, age 74, both hemispheres
52.1
2317
Female, age 72, unknown
45.3
1980
Male, age 76, both hemispheres
40.8
2014
Male, age 55, unknown
37.0
2123
Female, age 91, both hemispheres
35.4
2788
Male, age 74, unknown
35.2
Medial parabrachial nucleus nTPM: 83.2
2463
Female, age 85, right hemisphere
96.8
2170
Female, age 91, both hemispheres
90.9
2786
Male, age 76, both hemispheres
88.1
2854
Male, age 80, both hemispheres
81.9
2156
Male, age 61, both hemispheres
58.3
Medial periolivary nuclei nTPM: 78.0
2081
Male, age 80, both hemispheres
100.7
2458
Female, age 91, both hemispheres
100.7
2791
Male, age 74, right hemisphere
71.0
2063
Male, age 76, both hemispheres
59.6
2171
Female, age 85, both hemispheres
57.7
Motor facial nucleus nTPM: 85.0
2126
Male, age 61, both hemispheres
111.4
2697
Female, age 85, both hemispheres
110.3
2795
Female, age 91, both hemispheres
86.4
2365
Male, age 74, right hemisphere
71.8
2327
Male, age 80, both hemispheres
70.9
2062
Male, age 76, both hemispheres
58.8
Motor trigeminal nucleus nTPM: 89.7
2321
Female, age 91, both hemispheres
96.4
2309
Male, age 76, both hemispheres
92.5
2560
Male, age 74, both hemispheres
92.1
2335
Male, age 61, both hemispheres
87.2
2079
Male, age 80, both hemispheres
80.2
Nuclei of the trapezoid body nTPM: 73.2
2166
Male, age 80, both hemispheres
97.2
2368
Female, age 91, both hemispheres
86.7
2159
Male, age 61, both hemispheres
81.0
1983
Male, age 76, both hemispheres
57.2
2735
Female, age 85, both hemispheres
44.1
Nucleus raphe magnus nTPM: 69.4
2459
Female, age 91, both hemispheres
91.3
2328
Male, age 80, both hemispheres
83.6
2051
Male, age 76, both hemispheres
76.7
2455
Male, age 74, both hemispheres
67.1
2160
Male, age 61, both hemispheres
55.1
2172
Female, age 85, both hemispheres
42.7
Paramedian reticular nucleus nTPM: 76.9
2057
Male, age 80, both hemispheres
81.3
2313
Male, age 61, both hemispheres
79.1
2050
Female, age 85, both hemispheres
74.4
2052
Male, age 76, both hemispheres
72.7
Pedunculopontine tegmental nucleus nTPM: 66.4
2334
Male, age 80, both hemispheres
76.4
2338
Male, age 61, both hemispheres
67.0
1921
Female, age 85, both hemispheres
55.8
Pontine nuclei nTPM: 88.0
2319
Female, age 91, both hemispheres
113.9
2115
Male, age 80, left hemisphere
107.0
2454
Male, age 74, left hemisphere
101.6
1968
Male, age 76, left hemisphere
87.2
2109
Female, age 72, unknown
87.0
1863
Male, age 55, unknown
79.3
2787
Female, age 85, both hemispheres
64.9
2727
Male, age 61, right hemisphere
63.2
Pontine raphe nucleus nTPM: 60.1
2122
Female, age 85, midline
60.5
2853
Male, age 76, midline
59.7
Posteroventral cochlear nucleus nTPM: 104.5
2135
Female, age 91, both hemispheres
143.2
2341
Male, age 80, both hemispheres
130.3
2371
Male, age 61, both hemispheres
96.0
2070
Male, age 76, both hemispheres
88.6
2752
Female, age 85, both hemispheres
64.3
Principal sensory trigeminal nucleus nTPM: 80.1
2367
Female, age 91, left hemisphere
104.0
2324
Male, age 76, both hemispheres
85.9
2008
Male, age 80, left hemisphere
66.0
2158
Male, age 61, both hemispheres
64.6
Reticular pontine nucleus, caudal nTPM: 91.4
2457
Female, age 91, both hemispheres
115.2
2559
Male, age 74, both hemispheres
91.6
2332
Male, age 80, right hemisphere
80.9
2092
Male, age 76, both hemispheres
77.9
Reticular pontine nucleus, oral nTPM: 89.4
2366
Female, age 91, both hemispheres
109.1
1939
Male, age 80, both hemispheres
97.5
2361
Male, age 74, both hemispheres
87.1
2012
Female, age 85, both hemispheres
76.8
2167
Male, age 76, both hemispheres
76.5
Reticulotegmental nucleus nTPM: 84.8
2452
Male, age 74, both hemispheres
96.3
2333
Male, age 80, both hemispheres
96.2
2322
Female, age 91, both hemispheres
89.7
2325
Male, age 76, both hemispheres
56.8
Spinal trigeminal nucleus, oral nTPM: 78.4
2164
Male, age 80, both hemispheres
100.6
1978
Male, age 76, both hemispheres
75.9
2737
Female, age 85, both hemispheres
58.8
Subcoeruleus area nTPM: 80.5
2369
Female, age 85, left hemisphere
112.2
2089
Male, age 76, left hemisphere
81.1
2451
Male, age 74, both hemispheres
79.3
1958
Male, age 80, both hemispheres
74.5
2323
Female, age 91, left hemisphere
55.5
Superior olive nTPM: 87.1
2329
Male, age 80, right hemisphere
98.3
2561
Female, age 91, both hemispheres
96.7
2020
Male, age 76, both hemispheres
95.9
2364
Male, age 74, right hemisphere
74.5
1875
Female, age 85, both hemispheres
69.9
Ventral periolivary nuclei nTPM: 77.3
2023
Male, age 76, both hemispheres
89.0
2165
Male, age 80, both hemispheres
81.4
2794
Female, age 91, left hemisphere
80.6
2130
Female, age 85, both hemispheres
58.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 81.1
2456
Female, age 91, both hemispheres
109.7
2161
Male, age 80, both hemispheres
81.3
1959
Male, age 76, both hemispheres
79.7
2840
Female, age 85, both hemispheres
78.7
2449
Male, age 74, both hemispheres
74.5
2359
Male, age 61, both hemispheres
62.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
