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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.8
nTPM
Monaco:
130.3
nTPM
Schmiedel:
44.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.8
HPA sample
nTPM
gdT-cell nTPM: 69.5
Samples: 6
Max nTPM: 92.5
Min nTPM: 47.4
P10809_1007
53.5
P10809_1022
90.1
P10809_1041
92.5
P10809_1060
47.4
P10809_1077
74.0
P10809_1098
59.4
MAIT T-cell nTPM: 80.8
Samples: 6
Max nTPM: 108.5
Min nTPM: 58.3
P10809_1006
58.3
P10809_1024
108.5
P10809_1043
66.8
P10809_1062
62.2
P10809_1083
87.1
P10809_1097
102.0
Memory CD4 T-cell nTPM: 56.2
Samples: 6
Max nTPM: 68.2
Min nTPM: 46.5
P10809_1014
46.5
P10809_1026
56.0
P10809_1045
68.2
P10809_1064
51.8
P10809_1086
63.9
P10809_1113
51.0
Memory CD8 T-cell nTPM: 64.0
Samples: 5
Max nTPM: 78.4
Min nTPM: 49.8
P10809_1012
49.8
P10809_1027
60.3
P10809_1046
78.4
P10809_1065
64.5
P10809_1111
67.2
Naive CD4 T-cell nTPM: 52.7
Samples: 6
Max nTPM: 60.1
Min nTPM: 41.8
P10809_1015
41.8
P10809_1030
57.5
P10809_1049
53.9
P10809_1068
52.1
P10809_1085
60.1
P10809_1112
51.0
Naive CD8 T-cell nTPM: 51.5
Samples: 6
Max nTPM: 71.0
Min nTPM: 34.7
P10809_1016
34.7
P10809_1031
40.7
P10809_1050
54.2
P10809_1069
63.0
P10809_1087
71.0
P10809_1110
45.3
T-reg nTPM: 73.5
Samples: 6
Max nTPM: 101.8
Min nTPM: 55.8
P10809_1018
69.9
P10809_1037
101.8
P10809_1056
72.9
P10809_1075
77.0
P10809_1094
55.8
P10809_1106
63.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 82.3
Samples: 4
Max nTPM: 108.8
Min nTPM: 65.4
RHH5202_R3573
77.9
RHH5230_R3602
108.8
RHH5259_R3631
77.0
RHH5288_R3660
65.4
Effector memory CD8 T-cell nTPM: 119.3
Samples: 4
Max nTPM: 142.4
Min nTPM: 100.8
RHH5203_R3574
142.4
RHH5231_R3603
113.1
RHH5260_R3632
120.8
RHH5289_R3661
100.8
MAIT T-cell nTPM: 130.3
Samples: 4
Max nTPM: 180.5
Min nTPM: 96.9
RHH5233_R3605
96.9
RHH5205_R3576
180.5
RHH5262_R3634
126.1
RHH5297_R3663
117.8
Memory CD4 T-cell TFH nTPM: 89.7
Samples: 4
Max nTPM: 122.2
Min nTPM: 61.9
RHH5300_R3666
82.2
RHH5236_R3608
122.2
RHH5265_R3637
92.3
RHH5208_R3579
61.9
Memory CD4 T-cell Th1 nTPM: 85.8
Samples: 4
Max nTPM: 108.0
Min nTPM: 66.2
RHH5210_R3581
87.2
RHH5302_R3668
66.2
RHH5238_R3610
81.8
RHH5267_R3639
108.0
Memory CD4 T-cell Th1/Th17 nTPM: 111.5
Samples: 4
Max nTPM: 145.8
Min nTPM: 94.6
RHH5303_R3669
100.0
RHH5211_R3582
145.8
RHH5239_R3611
105.6
RHH5268_R3640
94.6
Memory CD4 T-cell Th17 nTPM: 120.1
Samples: 4
Max nTPM: 131.7
Min nTPM: 103.5
RHH5304_R3670
126.1
RHH5212_R3583
119.0
RHH5240_R3612
131.7
RHH5269_R3641
103.5
Memory CD4 T-cell Th2 nTPM: 92.7
Samples: 4
Max nTPM: 106.1
Min nTPM: 71.2
RHH5305_R3671
94.8
RHH5213_R3584
98.5
RHH5241_R3613
71.2
RHH5270_R3642
106.1
Naive CD4 T-cell nTPM: 93.1
Samples: 4
Max nTPM: 104.8
Min nTPM: 66.5
RHH5306_R3672
66.5
RHH5214_R3585
103.8
RHH5242_R3614
97.1
RHH5271_R3643
104.8
Naive CD8 T-cell nTPM: 66.9
Samples: 4
Max nTPM: 84.6
Min nTPM: 42.5
RHH5201_R3572
42.5
RHH5229_R3601
63.8
RHH5258_R3630
76.5
RHH5287_R3659
84.6
Non-Vd2 gdTCR nTPM: 123.2
Samples: 4
Max nTPM: 155.9
Min nTPM: 92.0
RHH5235_R3607
155.9
RHH5264_R3636
136.3
RHH5207_R3578
108.5
RHH5299_R3665
92.0
T-reg nTPM: 94.0
Samples: 4
Max nTPM: 133.4
Min nTPM: 66.8
RHH5301_R3667
66.8
RHH5237_R3609
133.4
RHH5266_R3638
87.5
RHH5209_R3580
88.1
Terminal effector memory CD4 T-cell nTPM: 106.4
Samples: 2
Max nTPM: 121.0
Min nTPM: 91.7
RHH5243_R3615
121.0
RHH5272_R3644
91.7
Terminal effector memory CD8 T-cell nTPM: 117.5
Samples: 4
Max nTPM: 142.6
Min nTPM: 103.4
RHH5232_R3604
115.7
RHH5204_R3575
108.2
RHH5261_R3633
142.6
RHH5296_R3662
103.4
Vd2 gdTCR nTPM: 127.8
Samples: 4
Max nTPM: 146.5
Min nTPM: 88.1
RHH5234_R3606
145.9
RHH5206_R3577
146.5
RHH5263_R3635
130.8
RHH5298_R3664
88.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
