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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.1
nTPM
Monaco:
118.5
nTPM
Schmiedel:
26.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.1
HPA sample
nTPM
gdT-cell nTPM: 34.4
Samples: 6
Max nTPM: 45.4
Min nTPM: 22.7
P10809_1007
22.7
P10809_1022
39.2
P10809_1041
32.2
P10809_1060
31.1
P10809_1077
36.0
P10809_1098
45.4
MAIT T-cell nTPM: 34.4
Samples: 6
Max nTPM: 54.1
Min nTPM: 22.4
P10809_1006
22.4
P10809_1024
35.5
P10809_1043
25.9
P10809_1062
34.1
P10809_1083
34.3
P10809_1097
54.1
Memory CD4 T-cell nTPM: 37.1
Samples: 6
Max nTPM: 45.0
Min nTPM: 29.1
P10809_1014
29.1
P10809_1026
41.7
P10809_1045
29.8
P10809_1064
34.1
P10809_1086
45.0
P10809_1113
43.1
Memory CD8 T-cell nTPM: 37.0
Samples: 5
Max nTPM: 54.9
Min nTPM: 20.4
P10809_1012
20.4
P10809_1027
33.1
P10809_1046
32.2
P10809_1065
44.4
P10809_1111
54.9
Naive CD4 T-cell nTPM: 39.0
Samples: 6
Max nTPM: 45.4
Min nTPM: 22.6
P10809_1015
22.6
P10809_1030
37.7
P10809_1049
45.4
P10809_1068
39.8
P10809_1085
44.3
P10809_1112
44.4
Naive CD8 T-cell nTPM: 36.7
Samples: 6
Max nTPM: 50.1
Min nTPM: 23.3
P10809_1016
23.3
P10809_1031
46.3
P10809_1050
29.9
P10809_1069
30.5
P10809_1087
50.1
P10809_1110
39.9
T-reg nTPM: 47.1
Samples: 6
Max nTPM: 60.3
Min nTPM: 22.4
P10809_1018
22.4
P10809_1037
60.3
P10809_1056
48.5
P10809_1075
43.7
P10809_1094
57.6
P10809_1106
50.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 100.0
Samples: 4
Max nTPM: 116.3
Min nTPM: 71.9
RHH5202_R3573
115.1
RHH5230_R3602
116.3
RHH5259_R3631
71.9
RHH5288_R3660
96.5
Effector memory CD8 T-cell nTPM: 118.6
Samples: 4
Max nTPM: 143.1
Min nTPM: 96.1
RHH5203_R3574
126.9
RHH5231_R3603
96.1
RHH5260_R3632
108.1
RHH5289_R3661
143.1
MAIT T-cell nTPM: 97.2
Samples: 4
Max nTPM: 133.1
Min nTPM: 75.8
RHH5233_R3605
133.1
RHH5205_R3576
93.5
RHH5262_R3634
86.3
RHH5297_R3663
75.8
Memory CD4 T-cell TFH nTPM: 114.9
Samples: 4
Max nTPM: 140.5
Min nTPM: 92.3
RHH5300_R3666
98.2
RHH5236_R3608
128.4
RHH5265_R3637
92.3
RHH5208_R3579
140.5
Memory CD4 T-cell Th1 nTPM: 87.8
Samples: 4
Max nTPM: 98.6
Min nTPM: 70.3
RHH5210_R3581
98.6
RHH5302_R3668
91.0
RHH5238_R3610
70.3
RHH5267_R3639
91.3
Memory CD4 T-cell Th1/Th17 nTPM: 95.4
Samples: 4
Max nTPM: 111.1
Min nTPM: 86.5
RHH5303_R3669
111.1
RHH5211_R3582
90.8
RHH5239_R3611
86.5
RHH5268_R3640
93.3
Memory CD4 T-cell Th17 nTPM: 100.2
Samples: 4
Max nTPM: 122.0
Min nTPM: 80.9
RHH5304_R3670
103.0
RHH5212_R3583
80.9
RHH5240_R3612
122.0
RHH5269_R3641
94.7
Memory CD4 T-cell Th2 nTPM: 116.1
Samples: 4
Max nTPM: 136.5
Min nTPM: 93.2
RHH5305_R3671
115.2
RHH5213_R3584
119.5
RHH5241_R3613
136.5
RHH5270_R3642
93.2
Naive CD4 T-cell nTPM: 100.2
Samples: 4
Max nTPM: 124.1
Min nTPM: 72.5
RHH5306_R3672
98.3
RHH5214_R3585
105.7
RHH5242_R3614
72.5
RHH5271_R3643
124.1
Naive CD8 T-cell nTPM: 86.6
Samples: 4
Max nTPM: 121.4
Min nTPM: 36.2
RHH5201_R3572
121.4
RHH5229_R3601
36.2
RHH5258_R3630
81.6
RHH5287_R3659
107.0
Non-Vd2 gdTCR nTPM: 115.6
Samples: 4
Max nTPM: 175.5
Min nTPM: 83.8
RHH5235_R3607
89.3
RHH5264_R3636
113.8
RHH5207_R3578
175.5
RHH5299_R3665
83.8
T-reg nTPM: 104.0
Samples: 4
Max nTPM: 110.4
Min nTPM: 100.3
RHH5301_R3667
100.3
RHH5237_R3609
110.4
RHH5266_R3638
101.4
RHH5209_R3580
103.7
Terminal effector memory CD4 T-cell nTPM: 108.7
Samples: 2
Max nTPM: 131.5
Min nTPM: 85.9
RHH5243_R3615
85.9
RHH5272_R3644
131.5
Terminal effector memory CD8 T-cell nTPM: 113.2
Samples: 4
Max nTPM: 125.5
Min nTPM: 93.0
RHH5232_R3604
124.7
RHH5204_R3575
93.0
RHH5261_R3633
109.6
RHH5296_R3662
125.5
Vd2 gdTCR nTPM: 96.6
Samples: 4
Max nTPM: 107.7
Min nTPM: 86.4
RHH5234_R3606
107.7
RHH5206_R3577
97.0
RHH5263_R3635
95.2
RHH5298_R3664
86.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
