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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
79.1
nTPM
GTEx:
79.1
nTPM
FANTOM5:
47.2
Scaled Tags Per Million
Pig:
7.1
nTPM
Mouse:
5.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
79.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 79.1
Samples: 105
Max nTPM: 154.3
Min nTPM: 38.8
Std nTPM: 19.7
Median nTPM: 0.0
414_1
84 years, female
154.3
466_1
57 years, female
131.2
413_1
59 years, female
124.5
415_1
77 years, female
117.9
237_1
82 years, male
106.9
316_1
62 years, male
106.4
490_1
67 years, female
106.1
229_1
69 years, female
106.0
491_1
89 years, female
105.8
389_1
86 years, female
105.6
126_1
63 years, male
105.1
468_1
89 years, male
105.1
246_1
77 years, male
101.5
375_1
74 years, female
101.5
142_1
61 years, female
101.1
495_1
57 years, female
98.9
254_1
77 years, female
97.5
266_1
85 years, male
97.4
217_1
76 years, male
97.2
162_1
79 years, female
96.6
396_1
62 years, male
96.4
265_1
87 years, male
95.4
153_1
70 years, female
94.4
377_1
82 years, female
94.2
81_1
67 years, male
93.8
405_1
91 years, male
93.8
322_1
76 years, male
93.7
518_1
75 years, female
93.3
319_1
81 years, male
92.2
313_1
79 years, female
90.1
526_1
61 years, male
89.8
189_1
76 years, male
89.0
425_1
59 years, female
88.8
286_1
68 years, female
87.7
352_1
62 years, male
87.1
321_1
62 years, female
86.0
6_1
73 years, female
85.3
307_1
66 years, female
84.4
35_1
74 years, female
84.3
447_1
81 years, male
83.8
394_1
75 years, female
83.4
480_1
63 years, male
81.3
376_1
75 years, female
81.1
32_1
67 years, male
80.7
379_1
60 years, male
80.1
404_1
82 years, female
79.5
311_1
78 years, male
78.8
149_1
88 years, male
77.6
17_1
71 years, male
77.5
318_1
68 years, male
77.4
347_1
72 years, male
76.9
172_1
72 years, female
76.3
406_1
79 years, male
76.2
503_1
68 years, male
76.2
43_1
64 years, female
75.4
324_1
76 years, male
75.3
499_1
55 years, female
75.0
354_1
81 years, female
74.9
335_1
73 years, female
74.3
173_1
67 years, male
73.5
315_1
62 years, female
73.2
348_1
84 years, male
73.2
243_1
75 years, male
73.0
349_1
83 years, male
71.7
384_1
83 years, male
71.4
139_1
64 years, female
71.2
292_1
71 years, male
71.0
314_1
67 years, male
70.9
291_1
76 years, male
70.7
117_1
61 years, male
69.5
251_1
78 years, male
69.4
89_1
63 years, male
69.2
2_1
77 years, female
68.9
501_1
88 years, male
68.8
320_1
89 years, female
67.8
355_1
70 years, female
66.7
386_1
76 years, male
66.0
218_1
71 years, female
65.7
137_1
83 years, male
65.6
42_1
85 years, male
64.9
517_1
88 years, male
64.4
4_1
88 years, female
63.4
350_1
84 years, female
63.3
18_1
88 years, male
63.2
9_1
66 years, female
62.7
163_1
78 years, male
62.4
295_1
61 years, female
62.3
115_1
83 years, male
61.8
109_1
81 years, female
61.6
145_1
84 years, male
61.5
288_1
66 years, female
60.4
356_1
87 years, female
59.0
293_1
68 years, female
58.6
120_1
70 years, female
57.7
452_1
88 years, female
56.6
177_1
74 years, male
56.0
264_1
73 years, female
55.6
308_1
70 years, female
51.4
353_1
82 years, female
49.9
351_1
91 years, male
49.5
119_1
70 years, female
45.1
99_1
64 years, male
43.2
41_1
94 years, female
43.0
317_1
60 years, male
42.6
506_1
65 years, male
38.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.