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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
264.5
nTPM
Monaco:
278.0
nTPM
Schmiedel:
192.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
264.5
HPA sample
nTPM
gdT-cell nTPM: 113.4
Samples: 6
Max nTPM: 151.0
Min nTPM: 54.9
P10809_1007
54.9
P10809_1022
130.0
P10809_1041
151.0
P10809_1060
119.9
P10809_1077
119.4
P10809_1098
105.3
MAIT T-cell nTPM: 124.3
Samples: 6
Max nTPM: 153.5
Min nTPM: 65.1
P10809_1006
65.1
P10809_1024
153.5
P10809_1043
134.9
P10809_1062
125.2
P10809_1083
116.3
P10809_1097
150.5
Memory CD4 T-cell nTPM: 120.4
Samples: 6
Max nTPM: 168.5
Min nTPM: 81.0
P10809_1014
81.0
P10809_1026
92.3
P10809_1045
117.5
P10809_1064
134.3
P10809_1086
168.5
P10809_1113
128.8
Memory CD8 T-cell nTPM: 149.7
Samples: 5
Max nTPM: 188.4
Min nTPM: 83.9
P10809_1012
83.9
P10809_1027
162.3
P10809_1046
138.1
P10809_1065
175.8
P10809_1111
188.4
Naive CD4 T-cell nTPM: 77.4
Samples: 6
Max nTPM: 105.6
Min nTPM: 43.3
P10809_1015
43.3
P10809_1030
66.3
P10809_1049
91.2
P10809_1068
81.1
P10809_1085
105.6
P10809_1112
77.0
Naive CD8 T-cell nTPM: 118.1
Samples: 6
Max nTPM: 168.2
Min nTPM: 47.7
P10809_1016
47.7
P10809_1031
109.8
P10809_1050
120.9
P10809_1069
140.6
P10809_1087
168.2
P10809_1110
121.3
T-reg nTPM: 264.5
Samples: 6
Max nTPM: 402.8
Min nTPM: 148.5
P10809_1018
148.5
P10809_1037
234.3
P10809_1056
402.8
P10809_1075
231.5
P10809_1094
294.3
P10809_1106
275.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
278.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.0
Samples: 4
Max nTPM: 162.2
Min nTPM: 111.9
RHH5202_R3573
162.2
RHH5230_R3602
143.3
RHH5259_R3631
111.9
RHH5288_R3660
122.6
Effector memory CD8 T-cell nTPM: 278.0
Samples: 4
Max nTPM: 327.0
Min nTPM: 225.4
RHH5203_R3574
327.0
RHH5231_R3603
251.9
RHH5260_R3632
225.4
RHH5289_R3661
307.7
MAIT T-cell nTPM: 170.5
Samples: 4
Max nTPM: 183.8
Min nTPM: 143.8
RHH5233_R3605
178.1
RHH5205_R3576
183.8
RHH5262_R3634
176.2
RHH5297_R3663
143.8
Memory CD4 T-cell TFH nTPM: 100.1
Samples: 4
Max nTPM: 121.6
Min nTPM: 73.9
RHH5300_R3666
112.2
RHH5236_R3608
121.6
RHH5265_R3637
92.5
RHH5208_R3579
73.9
Memory CD4 T-cell Th1 nTPM: 105.2
Samples: 4
Max nTPM: 129.8
Min nTPM: 70.7
RHH5210_R3581
95.4
RHH5302_R3668
129.8
RHH5238_R3610
70.7
RHH5267_R3639
124.9
Memory CD4 T-cell Th1/Th17 nTPM: 156.1
Samples: 4
Max nTPM: 214.9
Min nTPM: 97.2
RHH5303_R3669
214.9
RHH5211_R3582
169.1
RHH5239_R3611
97.2
RHH5268_R3640
143.2
Memory CD4 T-cell Th17 nTPM: 144.7
Samples: 4
Max nTPM: 183.5
Min nTPM: 96.3
RHH5304_R3670
183.5
RHH5212_R3583
96.3
RHH5240_R3612
141.8
RHH5269_R3641
157.1
Memory CD4 T-cell Th2 nTPM: 144.2
Samples: 4
Max nTPM: 159.4
Min nTPM: 123.3
RHH5305_R3671
150.7
RHH5213_R3584
159.4
RHH5241_R3613
123.3
RHH5270_R3642
143.5
Naive CD4 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 82.0
Min nTPM: 45.3
RHH5306_R3672
45.3
RHH5214_R3585
60.7
RHH5242_R3614
56.1
RHH5271_R3643
82.0
Naive CD8 T-cell nTPM: 74.8
Samples: 4
Max nTPM: 78.8
Min nTPM: 63.3
RHH5201_R3572
78.6
RHH5229_R3601
63.3
RHH5258_R3630
78.4
RHH5287_R3659
78.8
Non-Vd2 gdTCR nTPM: 198.1
Samples: 4
Max nTPM: 224.5
Min nTPM: 182.3
RHH5235_R3607
200.5
RHH5264_R3636
182.3
RHH5207_R3578
224.5
RHH5299_R3665
185.1
T-reg nTPM: 161.6
Samples: 4
Max nTPM: 212.9
Min nTPM: 136.0
RHH5301_R3667
157.5
RHH5237_R3609
212.9
RHH5266_R3638
136.0
RHH5209_R3580
140.0
Terminal effector memory CD4 T-cell nTPM: 214.7
Samples: 2
Max nTPM: 230.5
Min nTPM: 198.8
RHH5243_R3615
230.5
RHH5272_R3644
198.8
Terminal effector memory CD8 T-cell nTPM: 228.0
Samples: 4
Max nTPM: 289.1
Min nTPM: 154.5
RHH5232_R3604
289.1
RHH5204_R3575
222.2
RHH5261_R3633
246.3
RHH5296_R3662
154.5
Vd2 gdTCR nTPM: 159.6
Samples: 4
Max nTPM: 202.5
Min nTPM: 126.4
RHH5234_R3606
146.1
RHH5206_R3577
202.5
RHH5263_R3635
163.5
RHH5298_R3664
126.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
