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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.4
nTPM
Monaco:
240.0
nTPM
Schmiedel:
210.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.4
HPA sample
nTPM
gdT-cell nTPM: 80.4
Samples: 6
Max nTPM: 191.7
Min nTPM: 33.3
P10809_1007
191.7
P10809_1022
57.5
P10809_1041
76.8
P10809_1060
33.3
P10809_1077
75.4
P10809_1098
47.6
MAIT T-cell nTPM: 59.6
Samples: 6
Max nTPM: 110.3
Min nTPM: 29.4
P10809_1006
75.0
P10809_1024
36.5
P10809_1043
53.8
P10809_1062
29.4
P10809_1083
52.3
P10809_1097
110.3
Memory CD4 T-cell nTPM: 38.3
Samples: 6
Max nTPM: 87.3
Min nTPM: 24.8
P10809_1014
87.3
P10809_1026
28.5
P10809_1045
31.2
P10809_1064
32.4
P10809_1086
25.7
P10809_1113
24.8
Memory CD8 T-cell nTPM: 73.2
Samples: 5
Max nTPM: 127.6
Min nTPM: 39.3
P10809_1012
127.6
P10809_1027
52.2
P10809_1046
76.1
P10809_1065
39.3
P10809_1111
70.7
Naive CD4 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 56.5
Min nTPM: 14.5
P10809_1015
46.5
P10809_1030
26.4
P10809_1049
56.5
P10809_1068
14.5
P10809_1085
23.3
P10809_1112
20.9
Naive CD8 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 54.2
Min nTPM: 28.5
P10809_1016
54.2
P10809_1031
30.1
P10809_1050
28.5
P10809_1069
35.0
P10809_1087
36.0
P10809_1110
46.3
T-reg nTPM: 43.1
Samples: 6
Max nTPM: 63.4
Min nTPM: 31.6
P10809_1018
56.5
P10809_1037
38.2
P10809_1056
63.4
P10809_1075
34.8
P10809_1094
31.6
P10809_1106
34.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
240.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.4
Samples: 4
Max nTPM: 117.4
Min nTPM: 69.2
RHH5202_R3573
86.3
RHH5230_R3602
69.2
RHH5259_R3631
108.8
RHH5288_R3660
117.4
Effector memory CD8 T-cell nTPM: 115.5
Samples: 4
Max nTPM: 182.5
Min nTPM: 81.2
RHH5203_R3574
97.5
RHH5231_R3603
100.7
RHH5260_R3632
182.5
RHH5289_R3661
81.2
MAIT T-cell nTPM: 103.7
Samples: 4
Max nTPM: 134.8
Min nTPM: 76.6
RHH5233_R3605
76.6
RHH5205_R3576
104.3
RHH5262_R3634
134.8
RHH5297_R3663
99.2
Memory CD4 T-cell TFH nTPM: 72.6
Samples: 4
Max nTPM: 80.3
Min nTPM: 63.4
RHH5300_R3666
80.3
RHH5236_R3608
71.1
RHH5265_R3637
63.4
RHH5208_R3579
75.6
Memory CD4 T-cell Th1 nTPM: 86.8
Samples: 4
Max nTPM: 97.1
Min nTPM: 63.2
RHH5210_R3581
63.2
RHH5302_R3668
97.1
RHH5238_R3610
95.8
RHH5267_R3639
91.2
Memory CD4 T-cell Th1/Th17 nTPM: 100.6
Samples: 4
Max nTPM: 149.2
Min nTPM: 74.8
RHH5303_R3669
101.9
RHH5211_R3582
76.4
RHH5239_R3611
74.8
RHH5268_R3640
149.2
Memory CD4 T-cell Th17 nTPM: 92.0
Samples: 4
Max nTPM: 109.3
Min nTPM: 66.4
RHH5304_R3670
97.7
RHH5212_R3583
109.3
RHH5240_R3612
66.4
RHH5269_R3641
94.6
Memory CD4 T-cell Th2 nTPM: 72.0
Samples: 4
Max nTPM: 80.9
Min nTPM: 63.8
RHH5305_R3671
80.9
RHH5213_R3584
68.0
RHH5241_R3613
63.8
RHH5270_R3642
75.2
Naive CD4 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 67.7
Min nTPM: 42.6
RHH5306_R3672
64.0
RHH5214_R3585
67.7
RHH5242_R3614
42.6
RHH5271_R3643
55.6
Naive CD8 T-cell nTPM: 64.2
Samples: 4
Max nTPM: 70.2
Min nTPM: 51.3
RHH5201_R3572
51.3
RHH5229_R3601
70.2
RHH5258_R3630
67.5
RHH5287_R3659
67.9
Non-Vd2 gdTCR nTPM: 212.8
Samples: 4
Max nTPM: 308.5
Min nTPM: 180.3
RHH5235_R3607
181.7
RHH5264_R3636
180.7
RHH5207_R3578
180.3
RHH5299_R3665
308.5
T-reg nTPM: 68.0
Samples: 4
Max nTPM: 88.4
Min nTPM: 44.2
RHH5301_R3667
88.4
RHH5237_R3609
44.2
RHH5266_R3638
74.0
RHH5209_R3580
65.2
Terminal effector memory CD4 T-cell nTPM: 133.1
Samples: 2
Max nTPM: 153.6
Min nTPM: 112.6
RHH5243_R3615
153.6
RHH5272_R3644
112.6
Terminal effector memory CD8 T-cell nTPM: 240.0
Samples: 4
Max nTPM: 343.1
Min nTPM: 143.2
RHH5232_R3604
143.2
RHH5204_R3575
343.1
RHH5261_R3633
300.3
RHH5296_R3662
173.4
Vd2 gdTCR nTPM: 174.2
Samples: 4
Max nTPM: 268.7
Min nTPM: 108.9
RHH5234_R3606
108.9
RHH5206_R3577
268.7
RHH5263_R3635
127.5
RHH5298_R3664
191.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
