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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
199.1
nTPM
Monaco:
296.5
nTPM
Schmiedel:
9.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.1
HPA sample
nTPM
gdT-cell nTPM: 54.7
Samples: 6
Max nTPM: 66.6
Min nTPM: 37.9
P10809_1007
37.9
P10809_1022
47.0
P10809_1041
65.3
P10809_1060
66.6
P10809_1077
54.7
P10809_1098
56.4
MAIT T-cell nTPM: 73.3
Samples: 6
Max nTPM: 85.8
Min nTPM: 56.7
P10809_1006
56.7
P10809_1024
81.1
P10809_1043
58.4
P10809_1062
74.6
P10809_1083
83.2
P10809_1097
85.8
Memory CD4 T-cell nTPM: 124.4
Samples: 6
Max nTPM: 154.5
Min nTPM: 105.5
P10809_1014
105.8
P10809_1026
146.4
P10809_1045
127.2
P10809_1064
105.5
P10809_1086
107.0
P10809_1113
154.5
Memory CD8 T-cell nTPM: 70.7
Samples: 5
Max nTPM: 96.1
Min nTPM: 60.2
P10809_1012
60.2
P10809_1027
62.7
P10809_1046
69.6
P10809_1065
64.8
P10809_1111
96.1
Naive CD4 T-cell nTPM: 151.5
Samples: 6
Max nTPM: 191.0
Min nTPM: 127.3
P10809_1015
127.3
P10809_1030
150.2
P10809_1049
191.0
P10809_1068
150.3
P10809_1085
127.6
P10809_1112
162.4
Naive CD8 T-cell nTPM: 93.1
Samples: 6
Max nTPM: 133.3
Min nTPM: 58.6
P10809_1016
106.2
P10809_1031
91.5
P10809_1050
87.4
P10809_1069
81.3
P10809_1087
58.6
P10809_1110
133.3
T-reg nTPM: 199.1
Samples: 6
Max nTPM: 240.4
Min nTPM: 151.3
P10809_1018
167.9
P10809_1037
151.3
P10809_1056
240.4
P10809_1075
209.7
P10809_1094
186.1
P10809_1106
239.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
296.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 171.4
Samples: 4
Max nTPM: 204.5
Min nTPM: 147.0
RHH5202_R3573
204.5
RHH5230_R3602
182.3
RHH5259_R3631
147.0
RHH5288_R3660
151.9
Effector memory CD8 T-cell nTPM: 151.7
Samples: 4
Max nTPM: 181.4
Min nTPM: 125.7
RHH5203_R3574
181.4
RHH5231_R3603
125.7
RHH5260_R3632
127.4
RHH5289_R3661
172.3
MAIT T-cell nTPM: 144.0
Samples: 4
Max nTPM: 166.7
Min nTPM: 113.6
RHH5233_R3605
166.7
RHH5205_R3576
161.0
RHH5262_R3634
113.6
RHH5297_R3663
134.8
Memory CD4 T-cell TFH nTPM: 296.5
Samples: 4
Max nTPM: 309.5
Min nTPM: 260.9
RHH5300_R3666
306.6
RHH5236_R3608
308.8
RHH5265_R3637
309.5
RHH5208_R3579
260.9
Memory CD4 T-cell Th1 nTPM: 201.2
Samples: 4
Max nTPM: 236.5
Min nTPM: 153.3
RHH5210_R3581
235.4
RHH5302_R3668
236.5
RHH5238_R3610
153.3
RHH5267_R3639
179.5
Memory CD4 T-cell Th1/Th17 nTPM: 196.3
Samples: 4
Max nTPM: 239.1
Min nTPM: 144.8
RHH5303_R3669
239.1
RHH5211_R3582
202.5
RHH5239_R3611
144.8
RHH5268_R3640
198.7
Memory CD4 T-cell Th17 nTPM: 278.2
Samples: 4
Max nTPM: 289.1
Min nTPM: 265.7
RHH5304_R3670
272.9
RHH5212_R3583
289.1
RHH5240_R3612
265.7
RHH5269_R3641
285.2
Memory CD4 T-cell Th2 nTPM: 260.3
Samples: 4
Max nTPM: 292.3
Min nTPM: 241.2
RHH5305_R3671
246.4
RHH5213_R3584
261.4
RHH5241_R3613
292.3
RHH5270_R3642
241.2
Naive CD4 T-cell nTPM: 264.5
Samples: 4
Max nTPM: 275.8
Min nTPM: 244.8
RHH5306_R3672
244.8
RHH5214_R3585
269.2
RHH5242_R3614
268.3
RHH5271_R3643
275.8
Naive CD8 T-cell nTPM: 218.0
Samples: 4
Max nTPM: 269.8
Min nTPM: 162.8
RHH5201_R3572
269.8
RHH5229_R3601
162.8
RHH5258_R3630
208.1
RHH5287_R3659
231.3
Non-Vd2 gdTCR nTPM: 110.0
Samples: 4
Max nTPM: 126.7
Min nTPM: 81.8
RHH5235_R3607
126.7
RHH5264_R3636
123.3
RHH5207_R3578
108.2
RHH5299_R3665
81.8
T-reg nTPM: 266.7
Samples: 4
Max nTPM: 311.1
Min nTPM: 224.5
RHH5301_R3667
311.1
RHH5237_R3609
257.0
RHH5266_R3638
274.3
RHH5209_R3580
224.5
Terminal effector memory CD4 T-cell nTPM: 122.0
Samples: 2
Max nTPM: 149.2
Min nTPM: 94.8
RHH5243_R3615
94.8
RHH5272_R3644
149.2
Terminal effector memory CD8 T-cell nTPM: 108.0
Samples: 4
Max nTPM: 126.1
Min nTPM: 71.8
RHH5232_R3604
112.2
RHH5204_R3575
126.1
RHH5261_R3633
71.8
RHH5296_R3662
122.0
Vd2 gdTCR nTPM: 109.6
Samples: 4
Max nTPM: 130.1
Min nTPM: 84.7
RHH5234_R3606
105.2
RHH5206_R3577
130.1
RHH5263_R3635
84.7
RHH5298_R3664
118.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
