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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.0
nTPM
Monaco:
272.7
nTPM
Schmiedel:
82.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.0
HPA sample
nTPM
gdT-cell nTPM: 42.1
Samples: 6
Max nTPM: 56.6
Min nTPM: 32.4
P10809_1007
35.5
P10809_1022
44.6
P10809_1041
56.6
P10809_1060
32.4
P10809_1077
50.5
P10809_1098
32.8
MAIT T-cell nTPM: 33.4
Samples: 6
Max nTPM: 43.3
Min nTPM: 27.1
P10809_1006
34.3
P10809_1024
33.6
P10809_1043
43.3
P10809_1062
34.5
P10809_1083
27.1
P10809_1097
27.6
Memory CD4 T-cell nTPM: 27.8
Samples: 6
Max nTPM: 40.8
Min nTPM: 19.7
P10809_1014
21.5
P10809_1026
24.4
P10809_1045
40.8
P10809_1064
28.0
P10809_1086
32.6
P10809_1113
19.7
Memory CD8 T-cell nTPM: 35.9
Samples: 5
Max nTPM: 40.8
Min nTPM: 29.0
P10809_1012
40.8
P10809_1027
29.0
P10809_1046
38.0
P10809_1065
38.9
P10809_1111
32.8
Naive CD4 T-cell nTPM: 35.9
Samples: 6
Max nTPM: 49.6
Min nTPM: 29.0
P10809_1015
29.0
P10809_1030
29.3
P10809_1049
49.6
P10809_1068
33.1
P10809_1085
37.7
P10809_1112
36.7
Naive CD8 T-cell nTPM: 34.7
Samples: 6
Max nTPM: 45.5
Min nTPM: 25.3
P10809_1016
25.3
P10809_1031
39.4
P10809_1050
37.2
P10809_1069
45.5
P10809_1087
31.4
P10809_1110
29.6
T-reg nTPM: 36.1
Samples: 6
Max nTPM: 49.6
Min nTPM: 20.9
P10809_1018
33.1
P10809_1037
38.7
P10809_1056
20.9
P10809_1075
26.9
P10809_1094
49.6
P10809_1106
47.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
272.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 192.5
Samples: 4
Max nTPM: 273.5
Min nTPM: 145.2
RHH5202_R3573
145.2
RHH5230_R3602
273.5
RHH5259_R3631
178.0
RHH5288_R3660
173.4
Effector memory CD8 T-cell nTPM: 217.7
Samples: 4
Max nTPM: 259.9
Min nTPM: 178.3
RHH5203_R3574
178.3
RHH5231_R3603
259.9
RHH5260_R3632
225.0
RHH5289_R3661
207.4
MAIT T-cell nTPM: 201.5
Samples: 4
Max nTPM: 236.8
Min nTPM: 183.2
RHH5233_R3605
192.4
RHH5205_R3576
236.8
RHH5262_R3634
183.2
RHH5297_R3663
193.4
Memory CD4 T-cell TFH nTPM: 107.5
Samples: 4
Max nTPM: 141.1
Min nTPM: 73.5
RHH5300_R3666
141.1
RHH5236_R3608
106.1
RHH5265_R3637
109.1
RHH5208_R3579
73.5
Memory CD4 T-cell Th1 nTPM: 189.2
Samples: 4
Max nTPM: 230.3
Min nTPM: 127.7
RHH5210_R3581
227.5
RHH5302_R3668
127.7
RHH5238_R3610
230.3
RHH5267_R3639
171.4
Memory CD4 T-cell Th1/Th17 nTPM: 187.4
Samples: 4
Max nTPM: 245.3
Min nTPM: 112.7
RHH5303_R3669
112.7
RHH5211_R3582
233.7
RHH5239_R3611
245.3
RHH5268_R3640
157.8
Memory CD4 T-cell Th17 nTPM: 165.2
Samples: 4
Max nTPM: 178.7
Min nTPM: 143.2
RHH5304_R3670
143.2
RHH5212_R3583
178.7
RHH5240_R3612
176.4
RHH5269_R3641
162.5
Memory CD4 T-cell Th2 nTPM: 181.6
Samples: 4
Max nTPM: 206.8
Min nTPM: 157.4
RHH5305_R3671
202.7
RHH5213_R3584
206.8
RHH5241_R3613
157.4
RHH5270_R3642
159.4
Naive CD4 T-cell nTPM: 225.6
Samples: 4
Max nTPM: 259.5
Min nTPM: 207.2
RHH5306_R3672
220.1
RHH5214_R3585
215.4
RHH5242_R3614
259.5
RHH5271_R3643
207.2
Naive CD8 T-cell nTPM: 199.3
Samples: 4
Max nTPM: 274.4
Min nTPM: 94.9
RHH5201_R3572
94.9
RHH5229_R3601
274.4
RHH5258_R3630
198.5
RHH5287_R3659
229.3
Non-Vd2 gdTCR nTPM: 215.7
Samples: 4
Max nTPM: 289.1
Min nTPM: 133.8
RHH5235_R3607
289.1
RHH5264_R3636
133.8
RHH5207_R3578
221.6
RHH5299_R3665
218.3
T-reg nTPM: 193.1
Samples: 4
Max nTPM: 232.1
Min nTPM: 176.1
RHH5301_R3667
182.9
RHH5237_R3609
232.1
RHH5266_R3638
176.1
RHH5209_R3580
181.1
Terminal effector memory CD4 T-cell nTPM: 272.7
Samples: 2
Max nTPM: 324.9
Min nTPM: 220.5
RHH5243_R3615
324.9
RHH5272_R3644
220.5
Terminal effector memory CD8 T-cell nTPM: 219.7
Samples: 4
Max nTPM: 277.6
Min nTPM: 160.5
RHH5232_R3604
247.1
RHH5204_R3575
193.7
RHH5261_R3633
277.6
RHH5296_R3662
160.5
Vd2 gdTCR nTPM: 207.3
Samples: 4
Max nTPM: 246.5
Min nTPM: 176.4
RHH5234_R3606
246.5
RHH5206_R3577
208.8
RHH5263_R3635
197.6
RHH5298_R3664
176.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
