We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.1
nTPM
Monaco:
92.4
nTPM
Schmiedel:
44.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.1
HPA sample
nTPM
gdT-cell nTPM: 61.5
Samples: 6
Max nTPM: 82.2
Min nTPM: 49.5
P10809_1007
49.5
P10809_1022
72.8
P10809_1041
82.2
P10809_1060
54.6
P10809_1077
56.4
P10809_1098
53.7
MAIT T-cell nTPM: 71.8
Samples: 6
Max nTPM: 100.5
Min nTPM: 50.3
P10809_1006
50.3
P10809_1024
82.2
P10809_1043
100.5
P10809_1062
64.0
P10809_1083
67.4
P10809_1097
66.3
Memory CD4 T-cell nTPM: 54.5
Samples: 6
Max nTPM: 64.7
Min nTPM: 46.8
P10809_1014
50.3
P10809_1026
53.9
P10809_1045
64.7
P10809_1064
53.8
P10809_1086
46.8
P10809_1113
57.5
Memory CD8 T-cell nTPM: 54.2
Samples: 5
Max nTPM: 63.7
Min nTPM: 45.6
P10809_1012
57.7
P10809_1027
51.3
P10809_1046
63.7
P10809_1065
45.6
P10809_1111
52.9
Naive CD4 T-cell nTPM: 61.9
Samples: 6
Max nTPM: 71.0
Min nTPM: 48.1
P10809_1015
48.1
P10809_1030
69.5
P10809_1049
69.4
P10809_1068
57.6
P10809_1085
55.7
P10809_1112
71.0
Naive CD8 T-cell nTPM: 54.3
Samples: 6
Max nTPM: 62.6
Min nTPM: 48.1
P10809_1016
55.1
P10809_1031
53.5
P10809_1050
52.1
P10809_1069
62.6
P10809_1087
48.1
P10809_1110
54.4
T-reg nTPM: 79.1
Samples: 6
Max nTPM: 92.7
Min nTPM: 71.2
P10809_1018
74.8
P10809_1037
78.1
P10809_1056
71.2
P10809_1075
71.4
P10809_1094
92.7
P10809_1106
86.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.1
Samples: 4
Max nTPM: 85.7
Min nTPM: 43.1
RHH5202_R3573
51.3
RHH5230_R3602
56.3
RHH5259_R3631
43.1
RHH5288_R3660
85.7
Effector memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 113.8
Min nTPM: 56.5
RHH5203_R3574
109.6
RHH5231_R3603
113.8
RHH5260_R3632
56.5
RHH5289_R3661
81.2
MAIT T-cell nTPM: 91.1
Samples: 4
Max nTPM: 110.9
Min nTPM: 65.9
RHH5233_R3605
103.4
RHH5205_R3576
65.9
RHH5262_R3634
84.0
RHH5297_R3663
110.9
Memory CD4 T-cell TFH nTPM: 62.3
Samples: 4
Max nTPM: 102.4
Min nTPM: 9.5
RHH5300_R3666
102.4
RHH5236_R3608
63.2
RHH5265_R3637
74.1
RHH5208_R3579
9.5
Memory CD4 T-cell Th1 nTPM: 77.6
Samples: 4
Max nTPM: 130.0
Min nTPM: 45.2
RHH5210_R3581
85.8
RHH5302_R3668
130.0
RHH5238_R3610
45.2
RHH5267_R3639
49.4
Memory CD4 T-cell Th1/Th17 nTPM: 64.4
Samples: 4
Max nTPM: 72.1
Min nTPM: 43.1
RHH5303_R3669
72.1
RHH5211_R3582
72.1
RHH5239_R3611
43.1
RHH5268_R3640
70.4
Memory CD4 T-cell Th17 nTPM: 62.2
Samples: 4
Max nTPM: 78.9
Min nTPM: 46.4
RHH5304_R3670
74.1
RHH5212_R3583
78.9
RHH5240_R3612
46.4
RHH5269_R3641
49.5
Memory CD4 T-cell Th2 nTPM: 82.2
Samples: 4
Max nTPM: 101.3
Min nTPM: 68.4
RHH5305_R3671
90.4
RHH5213_R3584
68.4
RHH5241_R3613
101.3
RHH5270_R3642
68.5
Naive CD4 T-cell nTPM: 72.1
Samples: 4
Max nTPM: 82.9
Min nTPM: 53.6
RHH5306_R3672
82.9
RHH5214_R3585
76.0
RHH5242_R3614
76.0
RHH5271_R3643
53.6
Naive CD8 T-cell nTPM: 52.5
Samples: 4
Max nTPM: 88.8
Min nTPM: 10.5
RHH5201_R3572
10.5
RHH5229_R3601
32.3
RHH5258_R3630
88.8
RHH5287_R3659
78.2
Non-Vd2 gdTCR nTPM: 85.3
Samples: 4
Max nTPM: 104.7
Min nTPM: 48.6
RHH5235_R3607
48.6
RHH5264_R3636
100.5
RHH5207_R3578
87.4
RHH5299_R3665
104.7
T-reg nTPM: 79.5
Samples: 4
Max nTPM: 109.2
Min nTPM: 58.6
RHH5301_R3667
109.2
RHH5237_R3609
88.0
RHH5266_R3638
58.6
RHH5209_R3580
62.2
Terminal effector memory CD4 T-cell nTPM: 84.5
Samples: 2
Max nTPM: 120.3
Min nTPM: 48.7
RHH5243_R3615
48.7
RHH5272_R3644
120.3
Terminal effector memory CD8 T-cell nTPM: 88.9
Samples: 4
Max nTPM: 117.5
Min nTPM: 49.5
RHH5232_R3604
117.5
RHH5204_R3575
79.8
RHH5261_R3633
49.5
RHH5296_R3662
108.9
Vd2 gdTCR nTPM: 92.4
Samples: 4
Max nTPM: 124.7
Min nTPM: 71.1
RHH5234_R3606
84.1
RHH5206_R3577
89.6
RHH5263_R3635
71.1
RHH5298_R3664
124.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
