HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:51.5 nTPM
HPA Brain:30.1 nTPM
GTEx:51.5 nTPM
FANTOM5:28.6 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:85.4 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026851Antibody HPA047562
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.1
Sample id Sample description nTPM
Hippocampus
nTPM: 30.1
2529 Female, age 94, left hemisphere 32.9
2621 Female, age 67, right hemisphere 32.6
1898 Male, age 80, left hemisphere 31.1
2148 Female, age 91, left hemisphere 29.2
1855 Male, age 76, left hemisphere 27.6
1911 Female, age 85, right hemisphere 27.2
Dentate gyrus
nTPM: 28.9
2530 Female, age 94, left hemisphere 33.3
2010 Male, age 76, both hemispheres 30.7
1927 Female, age 91, both hemispheres 29.9
2528 Male, age 74, both hemispheres 27.7
2531 Female, age 67, both hemispheres 26.6
2246 Female, age 85, both hemispheres 25.1
Entorhinal gyrus
nTPM: 27.7
2764 Male, age 80, right hemisphere 30.2
1787 Male, age 76, left hemisphere 29.7
1938 Female, age 85, left hemisphere 29.2
2686 Male, age 75, right hemisphere 27.0
2117 Female, age 91, right hemisphere 26.5
2613 Female, age 94, left hemisphere 23.9
Hippocampus, CA1
nTPM: 28.3
2749 Male, age 80, left hemisphere 36.7
2527 Male, age 74, both hemispheres 28.6
2082 Female, age 91, right hemisphere 28.0
2045 Male, age 76, both hemispheres 24.5
1873 Female, age 85, both hemispheres 24.0
Hippocampus, CA2
nTPM: 29.9
1892 Male, age 76, both hemispheres 34.3
1963 Male, age 80, left hemisphere 33.5
1940 Female, age 85, left hemisphere 29.9
2249 Male, age 74, both hemispheres 28.4
2437 Female, age 94, left hemisphere 28.3
2113 Female, age 91, right hemisphere 24.9
Hippocampus, CA3
nTPM: 27.2
2137 Male, age 80, left hemisphere 31.7
1867 Male, age 76, both hemispheres 30.2
1891 Female, age 85, both hemispheres 27.4
2620 Female, age 94, left hemisphere 26.2
2436 Male, age 74, both hemispheres 25.5
2861 Female, age 67, both hemispheres 22.6
Parahippocampal cortex
nTPM: 27.3
2245 Female, age 91, both hemispheres 31.5
2018 Male, age 76, both hemispheres 29.2
1990 Female, age 91, right hemisphere 29.1
1933 Female, age 85, both hemispheres 28.7
1850 Male, age 80, both hemispheres 28.5
2532 Female, age 72, left hemisphere 26.8
2692 Male, age 74, both hemispheres 25.8
2622 Female, age 67, right hemisphere 25.5
2250 Female, age 67, right hemisphere 24.8
2693 Female, age 94, both hemispheres 22.6
Perirhinal gyrus
nTPM: 26.8
1847 Female, age 91, left hemisphere 29.0
2521 Female, age 94, right hemisphere 27.8
1794 Male, age 80, right hemisphere 26.6
2848 Male, age 76, right hemisphere 25.8
1841 Female, age 85, right hemisphere 24.8
Subiculum
nTPM: 29.4
2438 Female, age 94, left hemisphere 33.2
2042 Male, age 76, both hemispheres 33.1
1901 Male, age 80, both hemispheres 31.6
1977 Female, age 85, both hemispheres 28.0
2619 Male, age 74, both hemispheres 27.2
2729 Female, age 91, right hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.5
Samples: 197

Max nTPM: 124.1
Min nTPM: 20.8
Std nTPM: 14.4
Median nTPM: 49.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 124.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 108.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 94.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 92.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 90.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 88.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 85.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 80.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 80.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 79.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 78.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.6
FF:10153-102I9 76 years, female 30.3
FF:10169-103B7 60 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 22.4
Min nTPM: 16.4
Sample A Female 22.4
Sample B Female 20.1
Sample C Male 18.3
Sample D Male 16.4
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 26.6
Min nTPM: 17.3
Sample A Female 26.6
Sample B Female 21.5
Sample C Male 22.7
Sample D Male 17.3
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 18.0
Sample A Female 18.0
Sample B Female 18.9
Sample C Male 19.2
Sample D Male 18.1
Ventral hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.7
Sample A Female 23.3
Sample B Female 19.7
Sample C Male 22.3
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.5
Samples: 4

Max nTPM: 88.6
Min nTPM: 78.4
Sample A Male 86.8
Sample B Male 88.0
Sample C Female 88.6
Sample D Female 78.4
Hippocampal formation
nTPM: 79.9
Samples: 4

Max nTPM: 89.1
Min nTPM: 70.9
Sample A Male 83.2
Sample B Male 76.2
Sample C Female 70.9
Sample D Female 89.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68546242 Antisense, RP_050120_02_C02, Mouse strain C57BL/6J (56 days, male) 1.6

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