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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
135.8
nTPM
Monaco:
130.1
nTPM
Schmiedel:
53.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.8
HPA sample
nTPM
gdT-cell nTPM: 85.2
Samples: 6
Max nTPM: 103.1
Min nTPM: 61.5
P10809_1007
61.5
P10809_1022
89.1
P10809_1041
103.1
P10809_1060
86.6
P10809_1077
79.1
P10809_1098
91.9
MAIT T-cell nTPM: 89.6
Samples: 6
Max nTPM: 118.4
Min nTPM: 52.5
P10809_1006
52.5
P10809_1024
99.8
P10809_1043
88.7
P10809_1062
93.6
P10809_1083
84.6
P10809_1097
118.4
Memory CD4 T-cell nTPM: 100.7
Samples: 6
Max nTPM: 116.7
Min nTPM: 74.2
P10809_1014
74.2
P10809_1026
116.7
P10809_1045
100.2
P10809_1064
101.7
P10809_1086
113.0
P10809_1113
98.2
Memory CD8 T-cell nTPM: 90.3
Samples: 5
Max nTPM: 112.4
Min nTPM: 62.6
P10809_1012
62.6
P10809_1027
84.0
P10809_1046
96.2
P10809_1065
112.4
P10809_1111
96.5
Naive CD4 T-cell nTPM: 96.3
Samples: 6
Max nTPM: 118.8
Min nTPM: 65.4
P10809_1015
65.4
P10809_1030
105.0
P10809_1049
118.8
P10809_1068
87.6
P10809_1085
103.2
P10809_1112
98.0
Naive CD8 T-cell nTPM: 87.1
Samples: 6
Max nTPM: 100.7
Min nTPM: 63.2
P10809_1016
63.2
P10809_1031
88.0
P10809_1050
90.5
P10809_1069
93.1
P10809_1087
100.7
P10809_1110
87.3
T-reg nTPM: 135.7
Samples: 6
Max nTPM: 157.2
Min nTPM: 76.8
P10809_1018
76.8
P10809_1037
138.2
P10809_1056
157.2
P10809_1075
143.0
P10809_1094
143.6
P10809_1106
155.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.7
Samples: 4
Max nTPM: 131.4
Min nTPM: 73.9
RHH5202_R3573
119.6
RHH5230_R3602
86.0
RHH5259_R3631
73.9
RHH5288_R3660
131.4
Effector memory CD8 T-cell nTPM: 127.8
Samples: 4
Max nTPM: 147.8
Min nTPM: 88.9
RHH5203_R3574
137.8
RHH5231_R3603
136.8
RHH5260_R3632
88.9
RHH5289_R3661
147.8
MAIT T-cell nTPM: 109.8
Samples: 4
Max nTPM: 140.2
Min nTPM: 77.3
RHH5233_R3605
115.5
RHH5205_R3576
77.3
RHH5262_R3634
140.2
RHH5297_R3663
106.1
Memory CD4 T-cell TFH nTPM: 130.1
Samples: 4
Max nTPM: 174.6
Min nTPM: 100.7
RHH5300_R3666
100.7
RHH5236_R3608
174.6
RHH5265_R3637
117.8
RHH5208_R3579
127.2
Memory CD4 T-cell Th1 nTPM: 103.6
Samples: 4
Max nTPM: 133.9
Min nTPM: 64.6
RHH5210_R3581
133.9
RHH5302_R3668
117.3
RHH5238_R3610
64.6
RHH5267_R3639
98.6
Memory CD4 T-cell Th1/Th17 nTPM: 102.4
Samples: 4
Max nTPM: 146.5
Min nTPM: 50.7
RHH5303_R3669
146.5
RHH5211_R3582
121.0
RHH5239_R3611
50.7
RHH5268_R3640
91.5
Memory CD4 T-cell Th17 nTPM: 87.5
Samples: 4
Max nTPM: 125.8
Min nTPM: 65.5
RHH5304_R3670
82.7
RHH5212_R3583
125.8
RHH5240_R3612
65.5
RHH5269_R3641
75.8
Memory CD4 T-cell Th2 nTPM: 116.5
Samples: 4
Max nTPM: 133.9
Min nTPM: 86.0
RHH5305_R3671
133.9
RHH5213_R3584
86.0
RHH5241_R3613
126.0
RHH5270_R3642
120.2
Naive CD4 T-cell nTPM: 108.3
Samples: 4
Max nTPM: 138.6
Min nTPM: 89.1
RHH5306_R3672
107.2
RHH5214_R3585
138.6
RHH5242_R3614
89.1
RHH5271_R3643
98.4
Naive CD8 T-cell nTPM: 94.8
Samples: 4
Max nTPM: 140.3
Min nTPM: 48.1
RHH5201_R3572
140.3
RHH5229_R3601
48.1
RHH5258_R3630
106.2
RHH5287_R3659
84.4
Non-Vd2 gdTCR nTPM: 110.3
Samples: 4
Max nTPM: 126.7
Min nTPM: 73.9
RHH5235_R3607
73.9
RHH5264_R3636
126.7
RHH5207_R3578
117.3
RHH5299_R3665
123.1
T-reg nTPM: 128.3
Samples: 4
Max nTPM: 184.2
Min nTPM: 100.1
RHH5301_R3667
127.0
RHH5237_R3609
184.2
RHH5266_R3638
102.0
RHH5209_R3580
100.1
Terminal effector memory CD4 T-cell nTPM: 88.5
Samples: 2
Max nTPM: 110.0
Min nTPM: 66.9
RHH5243_R3615
66.9
RHH5272_R3644
110.0
Terminal effector memory CD8 T-cell nTPM: 123.0
Samples: 4
Max nTPM: 141.7
Min nTPM: 85.0
RHH5232_R3604
129.8
RHH5204_R3575
135.4
RHH5261_R3633
85.0
RHH5296_R3662
141.7
Vd2 gdTCR nTPM: 106.5
Samples: 4
Max nTPM: 126.8
Min nTPM: 72.3
RHH5234_R3606
109.8
RHH5206_R3577
126.8
RHH5263_R3635
72.3
RHH5298_R3664
116.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
