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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.6
nTPM
Monaco:
137.8
nTPM
Schmiedel:
232.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.6
HPA sample
nTPM
gdT-cell nTPM: 51.6
Samples: 6
Max nTPM: 71.0
Min nTPM: 29.6
P10809_1007
29.6
P10809_1022
46.2
P10809_1041
48.0
P10809_1060
71.0
P10809_1077
64.3
P10809_1098
50.4
MAIT T-cell nTPM: 46.1
Samples: 6
Max nTPM: 61.1
Min nTPM: 34.5
P10809_1006
34.5
P10809_1024
40.3
P10809_1043
49.8
P10809_1062
61.1
P10809_1083
54.5
P10809_1097
36.1
Memory CD4 T-cell nTPM: 44.1
Samples: 6
Max nTPM: 55.0
Min nTPM: 27.9
P10809_1014
27.9
P10809_1026
37.0
P10809_1045
42.3
P10809_1064
50.7
P10809_1086
51.4
P10809_1113
55.0
Memory CD8 T-cell nTPM: 46.4
Samples: 5
Max nTPM: 57.9
Min nTPM: 33.3
P10809_1012
33.3
P10809_1027
45.4
P10809_1046
49.1
P10809_1065
57.9
P10809_1111
46.5
Naive CD4 T-cell nTPM: 46.6
Samples: 6
Max nTPM: 58.5
Min nTPM: 29.0
P10809_1015
29.0
P10809_1030
36.8
P10809_1049
58.5
P10809_1068
56.7
P10809_1085
48.8
P10809_1112
49.8
Naive CD8 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 58.0
Min nTPM: 29.4
P10809_1016
29.5
P10809_1031
29.4
P10809_1050
38.4
P10809_1069
55.8
P10809_1087
58.0
P10809_1110
48.3
T-reg nTPM: 40.8
Samples: 6
Max nTPM: 52.5
Min nTPM: 24.8
P10809_1018
24.8
P10809_1037
34.6
P10809_1056
52.5
P10809_1075
43.6
P10809_1094
43.9
P10809_1106
45.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.2
Samples: 4
Max nTPM: 147.7
Min nTPM: 85.7
RHH5202_R3573
135.1
RHH5230_R3602
104.2
RHH5259_R3631
85.7
RHH5288_R3660
147.7
Effector memory CD8 T-cell nTPM: 125.0
Samples: 4
Max nTPM: 139.6
Min nTPM: 97.1
RHH5203_R3574
134.9
RHH5231_R3603
128.2
RHH5260_R3632
97.1
RHH5289_R3661
139.6
MAIT T-cell nTPM: 113.8
Samples: 4
Max nTPM: 139.3
Min nTPM: 78.5
RHH5233_R3605
139.3
RHH5205_R3576
78.5
RHH5262_R3634
114.6
RHH5297_R3663
122.8
Memory CD4 T-cell TFH nTPM: 137.6
Samples: 4
Max nTPM: 164.9
Min nTPM: 111.6
RHH5300_R3666
111.6
RHH5236_R3608
152.4
RHH5265_R3637
121.3
RHH5208_R3579
164.9
Memory CD4 T-cell Th1 nTPM: 122.8
Samples: 4
Max nTPM: 143.8
Min nTPM: 102.1
RHH5210_R3581
143.8
RHH5302_R3668
140.9
RHH5238_R3610
104.3
RHH5267_R3639
102.1
Memory CD4 T-cell Th1/Th17 nTPM: 118.2
Samples: 4
Max nTPM: 176.3
Min nTPM: 69.4
RHH5303_R3669
176.3
RHH5211_R3582
135.2
RHH5239_R3611
69.4
RHH5268_R3640
92.0
Memory CD4 T-cell Th17 nTPM: 100.3
Samples: 4
Max nTPM: 112.7
Min nTPM: 87.9
RHH5304_R3670
109.5
RHH5212_R3583
112.7
RHH5240_R3612
91.0
RHH5269_R3641
87.9
Memory CD4 T-cell Th2 nTPM: 119.8
Samples: 4
Max nTPM: 156.7
Min nTPM: 103.5
RHH5305_R3671
103.5
RHH5213_R3584
113.8
RHH5241_R3613
156.7
RHH5270_R3642
105.1
Naive CD4 T-cell nTPM: 115.0
Samples: 4
Max nTPM: 148.5
Min nTPM: 87.2
RHH5306_R3672
116.0
RHH5214_R3585
108.1
RHH5242_R3614
148.5
RHH5271_R3643
87.2
Naive CD8 T-cell nTPM: 105.3
Samples: 4
Max nTPM: 135.3
Min nTPM: 61.3
RHH5201_R3572
135.3
RHH5229_R3601
61.3
RHH5258_R3630
125.5
RHH5287_R3659
98.9
Non-Vd2 gdTCR nTPM: 137.3
Samples: 4
Max nTPM: 154.1
Min nTPM: 116.3
RHH5235_R3607
116.3
RHH5264_R3636
132.8
RHH5207_R3578
154.1
RHH5299_R3665
145.9
T-reg nTPM: 112.5
Samples: 4
Max nTPM: 144.0
Min nTPM: 81.6
RHH5301_R3667
120.2
RHH5237_R3609
144.0
RHH5266_R3638
81.6
RHH5209_R3580
104.2
Terminal effector memory CD4 T-cell nTPM: 123.8
Samples: 2
Max nTPM: 140.6
Min nTPM: 106.9
RHH5243_R3615
106.9
RHH5272_R3644
140.6
Terminal effector memory CD8 T-cell nTPM: 137.8
Samples: 4
Max nTPM: 172.4
Min nTPM: 86.3
RHH5232_R3604
149.0
RHH5204_R3575
172.4
RHH5261_R3633
86.3
RHH5296_R3662
143.6
Vd2 gdTCR nTPM: 128.3
Samples: 4
Max nTPM: 144.4
Min nTPM: 100.6
RHH5234_R3606
130.9
RHH5206_R3577
144.4
RHH5263_R3635
100.6
RHH5298_R3664
137.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
