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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.8
nTPM
Monaco:
213.7
nTPM
Schmiedel:
96.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.8
HPA sample
nTPM
gdT-cell nTPM: 30.0
Samples: 6
Max nTPM: 45.9
Min nTPM: 20.4
P10809_1007
22.3
P10809_1022
29.5
P10809_1041
23.2
P10809_1060
45.9
P10809_1077
38.6
P10809_1098
20.4
MAIT T-cell nTPM: 27.6
Samples: 6
Max nTPM: 48.8
Min nTPM: 18.5
P10809_1006
20.3
P10809_1024
28.2
P10809_1043
18.5
P10809_1062
48.8
P10809_1083
30.5
P10809_1097
19.5
Memory CD4 T-cell nTPM: 31.8
Samples: 6
Max nTPM: 44.9
Min nTPM: 23.0
P10809_1014
24.8
P10809_1026
31.2
P10809_1045
23.2
P10809_1064
43.5
P10809_1086
44.9
P10809_1113
23.0
Memory CD8 T-cell nTPM: 26.1
Samples: 5
Max nTPM: 39.8
Min nTPM: 18.1
P10809_1012
18.1
P10809_1027
28.1
P10809_1046
19.8
P10809_1065
39.8
P10809_1111
24.5
Naive CD4 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 42.7
Min nTPM: 24.5
P10809_1015
29.9
P10809_1030
25.1
P10809_1049
34.3
P10809_1068
42.7
P10809_1085
31.6
P10809_1112
24.5
Naive CD8 T-cell nTPM: 26.8
Samples: 6
Max nTPM: 38.2
Min nTPM: 17.2
P10809_1016
22.4
P10809_1031
25.3
P10809_1050
24.6
P10809_1069
33.2
P10809_1087
38.2
P10809_1110
17.2
T-reg nTPM: 28.4
Samples: 6
Max nTPM: 35.9
Min nTPM: 17.3
P10809_1018
17.4
P10809_1037
34.4
P10809_1056
33.4
P10809_1075
35.9
P10809_1094
32.2
P10809_1106
17.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
213.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 198.2
Samples: 4
Max nTPM: 233.1
Min nTPM: 140.0
RHH5202_R3573
218.6
RHH5230_R3602
233.1
RHH5259_R3631
140.0
RHH5288_R3660
201.2
Effector memory CD8 T-cell nTPM: 180.6
Samples: 4
Max nTPM: 228.8
Min nTPM: 138.3
RHH5203_R3574
212.7
RHH5231_R3603
142.7
RHH5260_R3632
138.3
RHH5289_R3661
228.8
MAIT T-cell nTPM: 177.0
Samples: 4
Max nTPM: 214.8
Min nTPM: 155.3
RHH5233_R3605
169.1
RHH5205_R3576
214.8
RHH5262_R3634
168.7
RHH5297_R3663
155.3
Memory CD4 T-cell TFH nTPM: 213.7
Samples: 4
Max nTPM: 250.3
Min nTPM: 179.0
RHH5300_R3666
179.0
RHH5236_R3608
250.3
RHH5265_R3637
200.1
RHH5208_R3579
225.3
Memory CD4 T-cell Th1 nTPM: 175.7
Samples: 4
Max nTPM: 188.3
Min nTPM: 165.4
RHH5210_R3581
165.4
RHH5302_R3668
188.3
RHH5238_R3610
165.9
RHH5267_R3639
183.3
Memory CD4 T-cell Th1/Th17 nTPM: 184.5
Samples: 4
Max nTPM: 205.7
Min nTPM: 163.1
RHH5303_R3669
203.7
RHH5211_R3582
205.7
RHH5239_R3611
165.6
RHH5268_R3640
163.1
Memory CD4 T-cell Th17 nTPM: 190.3
Samples: 4
Max nTPM: 208.7
Min nTPM: 173.2
RHH5304_R3670
208.7
RHH5212_R3583
173.2
RHH5240_R3612
203.4
RHH5269_R3641
175.7
Memory CD4 T-cell Th2 nTPM: 206.6
Samples: 4
Max nTPM: 238.8
Min nTPM: 176.3
RHH5305_R3671
176.3
RHH5213_R3584
228.8
RHH5241_R3613
238.8
RHH5270_R3642
182.3
Naive CD4 T-cell nTPM: 198.9
Samples: 4
Max nTPM: 239.2
Min nTPM: 151.5
RHH5306_R3672
181.2
RHH5214_R3585
223.5
RHH5242_R3614
239.2
RHH5271_R3643
151.5
Naive CD8 T-cell nTPM: 158.9
Samples: 4
Max nTPM: 210.8
Min nTPM: 130.9
RHH5201_R3572
210.8
RHH5229_R3601
130.9
RHH5258_R3630
150.1
RHH5287_R3659
143.9
Non-Vd2 gdTCR nTPM: 184.4
Samples: 4
Max nTPM: 222.9
Min nTPM: 144.4
RHH5235_R3607
206.0
RHH5264_R3636
144.4
RHH5207_R3578
222.9
RHH5299_R3665
164.1
T-reg nTPM: 210.5
Samples: 4
Max nTPM: 233.6
Min nTPM: 176.3
RHH5301_R3667
176.3
RHH5237_R3609
233.6
RHH5266_R3638
221.6
RHH5209_R3580
210.6
Terminal effector memory CD4 T-cell nTPM: 195.2
Samples: 2
Max nTPM: 214.0
Min nTPM: 176.3
RHH5243_R3615
214.0
RHH5272_R3644
176.3
Terminal effector memory CD8 T-cell nTPM: 173.9
Samples: 4
Max nTPM: 200.2
Min nTPM: 127.9
RHH5232_R3604
181.9
RHH5204_R3575
200.2
RHH5261_R3633
127.9
RHH5296_R3662
185.7
Vd2 gdTCR nTPM: 171.5
Samples: 4
Max nTPM: 197.2
Min nTPM: 160.8
RHH5234_R3606
197.2
RHH5206_R3577
162.4
RHH5263_R3635
165.5
RHH5298_R3664
160.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
