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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.6
nTPM
Monaco:
526.5
nTPM
Schmiedel:
162.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.6
HPA sample
nTPM
gdT-cell nTPM: 38.7
Samples: 6
Max nTPM: 59.3
Min nTPM: 22.6
P10809_1007
33.4
P10809_1022
46.0
P10809_1041
25.7
P10809_1060
59.3
P10809_1077
44.9
P10809_1098
22.6
MAIT T-cell nTPM: 27.7
Samples: 6
Max nTPM: 49.0
Min nTPM: 14.3
P10809_1006
19.5
P10809_1024
19.0
P10809_1043
23.3
P10809_1062
41.2
P10809_1083
49.0
P10809_1097
14.3
Memory CD4 T-cell nTPM: 24.4
Samples: 6
Max nTPM: 37.6
Min nTPM: 13.8
P10809_1014
13.8
P10809_1026
20.0
P10809_1045
20.6
P10809_1064
36.5
P10809_1086
37.6
P10809_1113
17.6
Memory CD8 T-cell nTPM: 28.0
Samples: 5
Max nTPM: 43.1
Min nTPM: 11.3
P10809_1012
11.3
P10809_1027
43.1
P10809_1046
32.5
P10809_1065
39.4
P10809_1111
13.5
Naive CD4 T-cell nTPM: 11.9
Samples: 6
Max nTPM: 16.9
Min nTPM: 9.4
P10809_1015
10.2
P10809_1030
9.4
P10809_1049
11.4
P10809_1068
13.1
P10809_1085
16.9
P10809_1112
10.1
Naive CD8 T-cell nTPM: 18.5
Samples: 6
Max nTPM: 32.4
Min nTPM: 8.2
P10809_1016
8.6
P10809_1031
26.2
P10809_1050
12.5
P10809_1069
23.2
P10809_1087
32.4
P10809_1110
8.2
T-reg nTPM: 30.2
Samples: 6
Max nTPM: 48.2
Min nTPM: 12.6
P10809_1018
12.6
P10809_1037
20.0
P10809_1056
37.6
P10809_1075
48.2
P10809_1094
43.0
P10809_1106
20.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
526.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 307.8
Samples: 4
Max nTPM: 347.7
Min nTPM: 258.6
RHH5202_R3573
347.7
RHH5230_R3602
300.5
RHH5259_R3631
324.4
RHH5288_R3660
258.6
Effector memory CD8 T-cell nTPM: 330.1
Samples: 4
Max nTPM: 477.6
Min nTPM: 198.2
RHH5203_R3574
339.6
RHH5231_R3603
305.0
RHH5260_R3632
198.2
RHH5289_R3661
477.6
MAIT T-cell nTPM: 410.0
Samples: 4
Max nTPM: 492.3
Min nTPM: 311.9
RHH5233_R3605
478.3
RHH5205_R3576
492.3
RHH5262_R3634
357.6
RHH5297_R3663
311.9
Memory CD4 T-cell TFH nTPM: 259.3
Samples: 4
Max nTPM: 335.4
Min nTPM: 193.6
RHH5300_R3666
217.4
RHH5236_R3608
193.6
RHH5265_R3637
335.4
RHH5208_R3579
290.7
Memory CD4 T-cell Th1 nTPM: 323.7
Samples: 4
Max nTPM: 480.4
Min nTPM: 179.8
RHH5210_R3581
315.2
RHH5302_R3668
179.8
RHH5238_R3610
480.4
RHH5267_R3639
319.4
Memory CD4 T-cell Th1/Th17 nTPM: 355.5
Samples: 4
Max nTPM: 544.1
Min nTPM: 240.3
RHH5303_R3669
280.9
RHH5211_R3582
240.3
RHH5239_R3611
544.1
RHH5268_R3640
356.7
Memory CD4 T-cell Th17 nTPM: 272.7
Samples: 4
Max nTPM: 389.2
Min nTPM: 227.1
RHH5304_R3670
231.1
RHH5212_R3583
243.5
RHH5240_R3612
227.1
RHH5269_R3641
389.2
Memory CD4 T-cell Th2 nTPM: 204.3
Samples: 4
Max nTPM: 274.0
Min nTPM: 148.4
RHH5305_R3671
148.4
RHH5213_R3584
174.9
RHH5241_R3613
274.0
RHH5270_R3642
220.0
Naive CD4 T-cell nTPM: 130.1
Samples: 4
Max nTPM: 190.4
Min nTPM: 86.1
RHH5306_R3672
87.1
RHH5214_R3585
86.1
RHH5242_R3614
190.4
RHH5271_R3643
156.9
Naive CD8 T-cell nTPM: 107.2
Samples: 4
Max nTPM: 117.8
Min nTPM: 86.9
RHH5201_R3572
108.7
RHH5229_R3601
115.5
RHH5258_R3630
117.8
RHH5287_R3659
86.9
Non-Vd2 gdTCR nTPM: 393.2
Samples: 4
Max nTPM: 559.9
Min nTPM: 187.1
RHH5235_R3607
522.3
RHH5264_R3636
187.1
RHH5207_R3578
559.9
RHH5299_R3665
303.4
T-reg nTPM: 209.6
Samples: 4
Max nTPM: 240.6
Min nTPM: 165.0
RHH5301_R3667
165.0
RHH5237_R3609
207.1
RHH5266_R3638
225.7
RHH5209_R3580
240.6
Terminal effector memory CD4 T-cell nTPM: 526.5
Samples: 2
Max nTPM: 627.0
Min nTPM: 426.0
RHH5243_R3615
627.0
RHH5272_R3644
426.0
Terminal effector memory CD8 T-cell nTPM: 353.5
Samples: 4
Max nTPM: 471.5
Min nTPM: 221.1
RHH5232_R3604
471.5
RHH5204_R3575
402.2
RHH5261_R3633
221.1
RHH5296_R3662
319.3
Vd2 gdTCR nTPM: 333.5
Samples: 4
Max nTPM: 452.0
Min nTPM: 274.7
RHH5234_R3606
452.0
RHH5206_R3577
274.7
RHH5263_R3635
303.6
RHH5298_R3664
303.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
