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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.1
nTPM
Monaco:
161.7
nTPM
Schmiedel:
827.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.1
HPA sample
nTPM
gdT-cell nTPM: 37.3
Samples: 6
Max nTPM: 43.2
Min nTPM: 28.5
P10809_1007
31.4
P10809_1022
40.2
P10809_1041
38.6
P10809_1060
41.8
P10809_1077
28.5
P10809_1098
43.2
MAIT T-cell nTPM: 55.0
Samples: 6
Max nTPM: 81.4
Min nTPM: 41.1
P10809_1006
54.8
P10809_1024
81.4
P10809_1043
54.1
P10809_1062
41.1
P10809_1083
49.5
P10809_1097
49.3
Memory CD4 T-cell nTPM: 53.3
Samples: 6
Max nTPM: 59.5
Min nTPM: 47.4
P10809_1014
54.7
P10809_1026
47.4
P10809_1045
59.5
P10809_1064
52.8
P10809_1086
50.0
P10809_1113
55.2
Memory CD8 T-cell nTPM: 51.2
Samples: 5
Max nTPM: 59.6
Min nTPM: 43.0
P10809_1012
54.4
P10809_1027
59.6
P10809_1046
43.0
P10809_1065
44.7
P10809_1111
54.1
Naive CD4 T-cell nTPM: 57.7
Samples: 6
Max nTPM: 71.3
Min nTPM: 49.9
P10809_1015
58.7
P10809_1030
63.7
P10809_1049
71.3
P10809_1068
49.9
P10809_1085
51.6
P10809_1112
51.0
Naive CD8 T-cell nTPM: 59.1
Samples: 6
Max nTPM: 83.3
Min nTPM: 45.6
P10809_1016
50.1
P10809_1031
83.3
P10809_1050
57.3
P10809_1069
54.0
P10809_1087
45.6
P10809_1110
64.2
T-reg nTPM: 58.2
Samples: 6
Max nTPM: 80.9
Min nTPM: 45.6
P10809_1018
55.9
P10809_1037
45.6
P10809_1056
53.6
P10809_1075
54.1
P10809_1094
58.9
P10809_1106
80.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 148.3
Samples: 4
Max nTPM: 179.0
Min nTPM: 122.1
RHH5202_R3573
179.0
RHH5230_R3602
147.9
RHH5259_R3631
122.1
RHH5288_R3660
144.1
Effector memory CD8 T-cell nTPM: 143.3
Samples: 4
Max nTPM: 167.3
Min nTPM: 121.4
RHH5203_R3574
167.3
RHH5231_R3603
145.0
RHH5260_R3632
139.5
RHH5289_R3661
121.4
MAIT T-cell nTPM: 134.0
Samples: 4
Max nTPM: 149.6
Min nTPM: 109.9
RHH5233_R3605
149.6
RHH5205_R3576
109.9
RHH5262_R3634
143.4
RHH5297_R3663
132.9
Memory CD4 T-cell TFH nTPM: 141.8
Samples: 4
Max nTPM: 156.0
Min nTPM: 129.3
RHH5300_R3666
131.8
RHH5236_R3608
156.0
RHH5265_R3637
129.3
RHH5208_R3579
150.1
Memory CD4 T-cell Th1 nTPM: 125.9
Samples: 4
Max nTPM: 146.6
Min nTPM: 102.6
RHH5210_R3581
133.7
RHH5302_R3668
146.6
RHH5238_R3610
102.6
RHH5267_R3639
120.5
Memory CD4 T-cell Th1/Th17 nTPM: 136.5
Samples: 4
Max nTPM: 189.9
Min nTPM: 94.0
RHH5303_R3669
142.4
RHH5211_R3582
189.9
RHH5239_R3611
94.0
RHH5268_R3640
119.7
Memory CD4 T-cell Th17 nTPM: 153.3
Samples: 4
Max nTPM: 179.2
Min nTPM: 117.2
RHH5304_R3670
164.8
RHH5212_R3583
179.2
RHH5240_R3612
151.8
RHH5269_R3641
117.2
Memory CD4 T-cell Th2 nTPM: 157.1
Samples: 4
Max nTPM: 191.0
Min nTPM: 127.2
RHH5305_R3671
150.2
RHH5213_R3584
191.0
RHH5241_R3613
160.0
RHH5270_R3642
127.2
Naive CD4 T-cell nTPM: 149.9
Samples: 4
Max nTPM: 153.9
Min nTPM: 140.3
RHH5306_R3672
152.8
RHH5214_R3585
153.9
RHH5242_R3614
140.3
RHH5271_R3643
152.4
Naive CD8 T-cell nTPM: 161.7
Samples: 4
Max nTPM: 190.6
Min nTPM: 119.4
RHH5201_R3572
190.6
RHH5229_R3601
119.4
RHH5258_R3630
174.1
RHH5287_R3659
162.8
Non-Vd2 gdTCR nTPM: 109.8
Samples: 4
Max nTPM: 134.4
Min nTPM: 91.0
RHH5235_R3607
105.6
RHH5264_R3636
134.4
RHH5207_R3578
108.1
RHH5299_R3665
91.0
T-reg nTPM: 160.0
Samples: 4
Max nTPM: 189.6
Min nTPM: 125.7
RHH5301_R3667
157.1
RHH5237_R3609
167.7
RHH5266_R3638
125.7
RHH5209_R3580
189.6
Terminal effector memory CD4 T-cell nTPM: 91.9
Samples: 2
Max nTPM: 116.3
Min nTPM: 67.4
RHH5243_R3615
67.4
RHH5272_R3644
116.3
Terminal effector memory CD8 T-cell nTPM: 108.9
Samples: 4
Max nTPM: 118.7
Min nTPM: 99.9
RHH5232_R3604
103.9
RHH5204_R3575
118.7
RHH5261_R3633
112.9
RHH5296_R3662
99.9
Vd2 gdTCR nTPM: 119.9
Samples: 4
Max nTPM: 131.2
Min nTPM: 107.4
RHH5234_R3606
107.4
RHH5206_R3577
115.5
RHH5263_R3635
131.2
RHH5298_R3664
125.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
