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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.6
nTPM
Monaco:
71.1
nTPM
Schmiedel:
29.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.6
HPA sample
nTPM
gdT-cell nTPM: 58.1
Samples: 6
Max nTPM: 77.0
Min nTPM: 42.6
P10809_1007
61.3
P10809_1022
57.3
P10809_1041
77.0
P10809_1060
42.6
P10809_1077
49.9
P10809_1098
60.4
MAIT T-cell nTPM: 59.5
Samples: 6
Max nTPM: 70.5
Min nTPM: 53.4
P10809_1006
54.3
P10809_1024
60.5
P10809_1043
56.7
P10809_1062
61.7
P10809_1083
53.4
P10809_1097
70.5
Memory CD4 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 81.7
Min nTPM: 50.8
P10809_1014
60.8
P10809_1026
81.7
P10809_1045
65.8
P10809_1064
55.2
P10809_1086
50.8
P10809_1113
67.9
Memory CD8 T-cell nTPM: 57.5
Samples: 5
Max nTPM: 66.1
Min nTPM: 45.4
P10809_1012
65.6
P10809_1027
45.4
P10809_1046
66.1
P10809_1065
50.2
P10809_1111
60.3
Naive CD4 T-cell nTPM: 60.0
Samples: 6
Max nTPM: 66.7
Min nTPM: 50.8
P10809_1015
66.7
P10809_1030
50.8
P10809_1049
63.4
P10809_1068
55.8
P10809_1085
64.0
P10809_1112
59.3
Naive CD8 T-cell nTPM: 54.9
Samples: 6
Max nTPM: 63.2
Min nTPM: 46.1
P10809_1016
63.2
P10809_1031
53.8
P10809_1050
57.5
P10809_1069
59.0
P10809_1087
46.1
P10809_1110
49.7
T-reg nTPM: 76.6
Samples: 6
Max nTPM: 108.4
Min nTPM: 54.8
P10809_1018
81.5
P10809_1037
54.8
P10809_1056
64.0
P10809_1075
61.5
P10809_1094
89.4
P10809_1106
108.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.9
Samples: 4
Max nTPM: 83.0
Min nTPM: 37.4
RHH5202_R3573
56.8
RHH5230_R3602
37.4
RHH5259_R3631
46.2
RHH5288_R3660
83.0
Effector memory CD8 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 64.4
Min nTPM: 31.2
RHH5203_R3574
40.4
RHH5231_R3603
64.4
RHH5260_R3632
31.2
RHH5289_R3661
43.9
MAIT T-cell nTPM: 51.8
Samples: 4
Max nTPM: 83.7
Min nTPM: 39.4
RHH5233_R3605
39.4
RHH5205_R3576
42.3
RHH5262_R3634
41.8
RHH5297_R3663
83.7
Memory CD4 T-cell TFH nTPM: 64.0
Samples: 4
Max nTPM: 73.2
Min nTPM: 51.2
RHH5300_R3666
70.6
RHH5236_R3608
51.2
RHH5265_R3637
61.0
RHH5208_R3579
73.2
Memory CD4 T-cell Th1 nTPM: 63.4
Samples: 4
Max nTPM: 108.9
Min nTPM: 37.6
RHH5210_R3581
59.8
RHH5302_R3668
108.9
RHH5238_R3610
47.2
RHH5267_R3639
37.6
Memory CD4 T-cell Th1/Th17 nTPM: 58.4
Samples: 4
Max nTPM: 99.4
Min nTPM: 24.3
RHH5303_R3669
99.4
RHH5211_R3582
63.2
RHH5239_R3611
24.3
RHH5268_R3640
46.7
Memory CD4 T-cell Th17 nTPM: 48.8
Samples: 4
Max nTPM: 61.1
Min nTPM: 30.4
RHH5304_R3670
54.5
RHH5212_R3583
61.1
RHH5240_R3612
49.1
RHH5269_R3641
30.4
Memory CD4 T-cell Th2 nTPM: 63.1
Samples: 4
Max nTPM: 72.1
Min nTPM: 52.3
RHH5305_R3671
72.1
RHH5213_R3584
57.7
RHH5241_R3613
70.1
RHH5270_R3642
52.3
Naive CD4 T-cell nTPM: 52.0
Samples: 4
Max nTPM: 68.6
Min nTPM: 36.4
RHH5306_R3672
68.6
RHH5214_R3585
62.4
RHH5242_R3614
36.4
RHH5271_R3643
40.5
Naive CD8 T-cell nTPM: 41.6
Samples: 4
Max nTPM: 53.3
Min nTPM: 25.5
RHH5201_R3572
53.3
RHH5229_R3601
25.5
RHH5258_R3630
44.1
RHH5287_R3659
43.6
Non-Vd2 gdTCR nTPM: 57.9
Samples: 4
Max nTPM: 75.3
Min nTPM: 35.2
RHH5235_R3607
35.2
RHH5264_R3636
58.1
RHH5207_R3578
63.0
RHH5299_R3665
75.3
T-reg nTPM: 68.6
Samples: 4
Max nTPM: 115.3
Min nTPM: 42.3
RHH5301_R3667
115.3
RHH5237_R3609
61.2
RHH5266_R3638
55.4
RHH5209_R3580
42.3
Terminal effector memory CD4 T-cell nTPM: 48.8
Samples: 2
Max nTPM: 51.6
Min nTPM: 46.0
RHH5243_R3615
46.0
RHH5272_R3644
51.6
Terminal effector memory CD8 T-cell nTPM: 71.1
Samples: 4
Max nTPM: 106.5
Min nTPM: 53.9
RHH5232_R3604
58.8
RHH5204_R3575
106.5
RHH5261_R3633
53.9
RHH5296_R3662
65.1
Vd2 gdTCR nTPM: 70.7
Samples: 4
Max nTPM: 115.5
Min nTPM: 20.6
RHH5234_R3606
46.6
RHH5206_R3577
115.5
RHH5263_R3635
20.6
RHH5298_R3664
100.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
