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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.2
nTPM
Monaco:
32.0
nTPM
Schmiedel:
38.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.2
HPA sample
nTPM
gdT-cell nTPM: 28.8
Samples: 6
Max nTPM: 31.7
Min nTPM: 25.5
P10809_1007
25.5
P10809_1022
30.9
P10809_1041
27.8
P10809_1060
28.2
P10809_1077
28.7
P10809_1098
31.7
MAIT T-cell nTPM: 34.6
Samples: 6
Max nTPM: 43.6
Min nTPM: 24.0
P10809_1006
24.0
P10809_1024
43.6
P10809_1043
25.4
P10809_1062
36.1
P10809_1083
35.1
P10809_1097
43.6
Memory CD4 T-cell nTPM: 33.1
Samples: 6
Max nTPM: 41.5
Min nTPM: 25.8
P10809_1014
29.6
P10809_1026
25.8
P10809_1045
32.5
P10809_1064
33.9
P10809_1086
41.5
P10809_1113
35.1
Memory CD8 T-cell nTPM: 35.1
Samples: 5
Max nTPM: 50.6
Min nTPM: 26.9
P10809_1012
31.1
P10809_1027
50.6
P10809_1046
26.9
P10809_1065
35.8
P10809_1111
31.2
Naive CD4 T-cell nTPM: 32.2
Samples: 6
Max nTPM: 36.9
Min nTPM: 26.2
P10809_1015
29.5
P10809_1030
26.2
P10809_1049
34.3
P10809_1068
34.6
P10809_1085
36.9
P10809_1112
31.5
Naive CD8 T-cell nTPM: 33.4
Samples: 6
Max nTPM: 45.5
Min nTPM: 22.1
P10809_1016
22.1
P10809_1031
45.5
P10809_1050
28.4
P10809_1069
36.5
P10809_1087
39.3
P10809_1110
28.4
T-reg nTPM: 38.2
Samples: 6
Max nTPM: 45.0
Min nTPM: 29.2
P10809_1018
32.3
P10809_1037
43.4
P10809_1056
43.5
P10809_1075
29.2
P10809_1094
35.8
P10809_1106
45.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 33.9
Min nTPM: 15.5
RHH5202_R3573
23.4
RHH5230_R3602
15.5
RHH5259_R3631
22.4
RHH5288_R3660
33.9
Effector memory CD8 T-cell nTPM: 22.4
Samples: 4
Max nTPM: 23.7
Min nTPM: 20.9
RHH5203_R3574
21.8
RHH5231_R3603
23.7
RHH5260_R3632
20.9
RHH5289_R3661
23.0
MAIT T-cell nTPM: 28.1
Samples: 4
Max nTPM: 37.8
Min nTPM: 19.4
RHH5233_R3605
25.5
RHH5205_R3576
19.4
RHH5262_R3634
37.8
RHH5297_R3663
29.7
Memory CD4 T-cell TFH nTPM: 31.7
Samples: 4
Max nTPM: 37.2
Min nTPM: 26.8
RHH5300_R3666
26.8
RHH5236_R3608
37.2
RHH5265_R3637
28.7
RHH5208_R3579
34.1
Memory CD4 T-cell Th1 nTPM: 22.3
Samples: 4
Max nTPM: 32.0
Min nTPM: 13.4
RHH5210_R3581
28.6
RHH5302_R3668
32.0
RHH5238_R3610
13.4
RHH5267_R3639
15.3
Memory CD4 T-cell Th1/Th17 nTPM: 28.1
Samples: 4
Max nTPM: 46.1
Min nTPM: 9.7
RHH5303_R3669
37.6
RHH5211_R3582
46.1
RHH5239_R3611
9.7
RHH5268_R3640
18.9
Memory CD4 T-cell Th17 nTPM: 25.3
Samples: 4
Max nTPM: 37.5
Min nTPM: 16.1
RHH5304_R3670
26.4
RHH5212_R3583
37.5
RHH5240_R3612
21.2
RHH5269_R3641
16.1
Memory CD4 T-cell Th2 nTPM: 30.2
Samples: 4
Max nTPM: 36.0
Min nTPM: 24.8
RHH5305_R3671
25.2
RHH5213_R3584
34.8
RHH5241_R3613
36.0
RHH5270_R3642
24.8
Naive CD4 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 33.7
Min nTPM: 15.4
RHH5306_R3672
26.1
RHH5214_R3585
33.7
RHH5242_R3614
19.0
RHH5271_R3643
15.4
Naive CD8 T-cell nTPM: 15.8
Samples: 4
Max nTPM: 21.8
Min nTPM: 11.9
RHH5201_R3572
21.8
RHH5229_R3601
11.9
RHH5258_R3630
13.8
RHH5287_R3659
15.6
Non-Vd2 gdTCR nTPM: 23.1
Samples: 4
Max nTPM: 32.0
Min nTPM: 12.1
RHH5235_R3607
21.0
RHH5264_R3636
32.0
RHH5207_R3578
12.1
RHH5299_R3665
27.3
T-reg nTPM: 32.0
Samples: 4
Max nTPM: 43.3
Min nTPM: 21.5
RHH5301_R3667
21.5
RHH5237_R3609
43.3
RHH5266_R3638
21.9
RHH5209_R3580
41.1
Terminal effector memory CD4 T-cell nTPM: 16.0
Samples: 2
Max nTPM: 16.8
Min nTPM: 15.2
RHH5243_R3615
16.8
RHH5272_R3644
15.2
Terminal effector memory CD8 T-cell nTPM: 30.3
Samples: 4
Max nTPM: 39.7
Min nTPM: 26.6
RHH5232_R3604
26.8
RHH5204_R3575
39.7
RHH5261_R3633
26.6
RHH5296_R3662
28.2
Vd2 gdTCR nTPM: 26.1
Samples: 4
Max nTPM: 35.3
Min nTPM: 17.5
RHH5234_R3606
21.1
RHH5206_R3577
35.3
RHH5263_R3635
17.5
RHH5298_R3664
30.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
