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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
182.0
nTPM
Monaco:
387.9
nTPM
Schmiedel:
253.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
182.0
HPA sample
nTPM
gdT-cell nTPM: 110.2
Samples: 6
Max nTPM: 133.3
Min nTPM: 85.4
P10809_1007
85.4
P10809_1022
133.3
P10809_1041
124.4
P10809_1060
95.4
P10809_1077
116.0
P10809_1098
106.4
MAIT T-cell nTPM: 136.6
Samples: 6
Max nTPM: 173.0
Min nTPM: 104.3
P10809_1006
152.8
P10809_1024
173.0
P10809_1043
104.3
P10809_1062
137.8
P10809_1083
105.3
P10809_1097
146.2
Memory CD4 T-cell nTPM: 137.2
Samples: 6
Max nTPM: 150.3
Min nTPM: 123.9
P10809_1014
141.8
P10809_1026
129.1
P10809_1045
149.5
P10809_1064
123.9
P10809_1086
128.7
P10809_1113
150.3
Memory CD8 T-cell nTPM: 121.5
Samples: 5
Max nTPM: 131.6
Min nTPM: 111.6
P10809_1012
129.4
P10809_1027
118.9
P10809_1046
111.6
P10809_1065
116.2
P10809_1111
131.6
Naive CD4 T-cell nTPM: 125.2
Samples: 6
Max nTPM: 149.2
Min nTPM: 112.5
P10809_1015
149.2
P10809_1030
117.4
P10809_1049
112.5
P10809_1068
122.7
P10809_1085
126.7
P10809_1112
122.5
Naive CD8 T-cell nTPM: 119.6
Samples: 6
Max nTPM: 128.9
Min nTPM: 106.8
P10809_1016
124.0
P10809_1031
109.0
P10809_1050
106.8
P10809_1069
127.6
P10809_1087
128.9
P10809_1110
121.4
T-reg nTPM: 182.1
Samples: 6
Max nTPM: 204.5
Min nTPM: 147.5
P10809_1018
186.5
P10809_1037
192.0
P10809_1056
147.5
P10809_1075
193.3
P10809_1094
204.5
P10809_1106
168.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
387.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 276.8
Samples: 4
Max nTPM: 311.0
Min nTPM: 260.4
RHH5202_R3573
311.0
RHH5230_R3602
263.9
RHH5259_R3631
271.7
RHH5288_R3660
260.4
Effector memory CD8 T-cell nTPM: 328.4
Samples: 4
Max nTPM: 368.2
Min nTPM: 288.6
RHH5203_R3574
368.2
RHH5231_R3603
288.6
RHH5260_R3632
348.5
RHH5289_R3661
308.3
MAIT T-cell nTPM: 315.5
Samples: 4
Max nTPM: 422.4
Min nTPM: 229.0
RHH5233_R3605
322.3
RHH5205_R3576
422.4
RHH5262_R3634
288.3
RHH5297_R3663
229.0
Memory CD4 T-cell TFH nTPM: 279.5
Samples: 4
Max nTPM: 343.4
Min nTPM: 228.2
RHH5300_R3666
228.2
RHH5236_R3608
254.8
RHH5265_R3637
291.6
RHH5208_R3579
343.4
Memory CD4 T-cell Th1 nTPM: 294.2
Samples: 4
Max nTPM: 312.8
Min nTPM: 255.8
RHH5210_R3581
301.4
RHH5302_R3668
255.8
RHH5238_R3610
306.7
RHH5267_R3639
312.8
Memory CD4 T-cell Th1/Th17 nTPM: 346.2
Samples: 4
Max nTPM: 435.2
Min nTPM: 274.8
RHH5303_R3669
274.8
RHH5211_R3582
435.2
RHH5239_R3611
357.2
RHH5268_R3640
317.6
Memory CD4 T-cell Th17 nTPM: 387.9
Samples: 4
Max nTPM: 504.9
Min nTPM: 324.5
RHH5304_R3670
360.1
RHH5212_R3583
362.1
RHH5240_R3612
504.9
RHH5269_R3641
324.5
Memory CD4 T-cell Th2 nTPM: 358.5
Samples: 4
Max nTPM: 401.3
Min nTPM: 308.5
RHH5305_R3671
308.5
RHH5213_R3584
393.4
RHH5241_R3613
330.8
RHH5270_R3642
401.3
Naive CD4 T-cell nTPM: 270.3
Samples: 4
Max nTPM: 307.7
Min nTPM: 235.6
RHH5306_R3672
235.6
RHH5214_R3585
262.1
RHH5242_R3614
275.8
RHH5271_R3643
307.7
Naive CD8 T-cell nTPM: 259.9
Samples: 4
Max nTPM: 325.5
Min nTPM: 225.7
RHH5201_R3572
325.5
RHH5229_R3601
252.5
RHH5258_R3630
235.7
RHH5287_R3659
225.7
Non-Vd2 gdTCR nTPM: 286.8
Samples: 4
Max nTPM: 335.7
Min nTPM: 201.6
RHH5235_R3607
298.4
RHH5264_R3636
311.6
RHH5207_R3578
335.7
RHH5299_R3665
201.6
T-reg nTPM: 293.7
Samples: 4
Max nTPM: 329.5
Min nTPM: 233.7
RHH5301_R3667
233.7
RHH5237_R3609
282.4
RHH5266_R3638
329.0
RHH5209_R3580
329.5
Terminal effector memory CD4 T-cell nTPM: 324.9
Samples: 2
Max nTPM: 355.4
Min nTPM: 294.3
RHH5243_R3615
355.4
RHH5272_R3644
294.3
Terminal effector memory CD8 T-cell nTPM: 289.1
Samples: 4
Max nTPM: 326.1
Min nTPM: 245.4
RHH5232_R3604
304.9
RHH5204_R3575
279.8
RHH5261_R3633
326.1
RHH5296_R3662
245.4
Vd2 gdTCR nTPM: 280.9
Samples: 4
Max nTPM: 377.4
Min nTPM: 198.6
RHH5234_R3606
260.5
RHH5206_R3577
286.9
RHH5263_R3635
377.4
RHH5298_R3664
198.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.