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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
103.8
nTPM
Monaco:
228.2
nTPM
Schmiedel:
250.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.8
HPA sample
nTPM
gdT-cell nTPM: 76.5
Samples: 6
Max nTPM: 103.7
Min nTPM: 53.1
P10809_1007
81.8
P10809_1022
86.7
P10809_1041
103.7
P10809_1060
53.1
P10809_1077
59.0
P10809_1098
74.6
MAIT T-cell nTPM: 103.8
Samples: 6
Max nTPM: 129.4
Min nTPM: 74.1
P10809_1006
127.2
P10809_1024
106.0
P10809_1043
129.4
P10809_1062
87.9
P10809_1083
74.1
P10809_1097
98.0
Memory CD4 T-cell nTPM: 54.2
Samples: 6
Max nTPM: 64.4
Min nTPM: 37.5
P10809_1014
64.4
P10809_1026
49.4
P10809_1045
59.5
P10809_1064
37.5
P10809_1086
52.4
P10809_1113
62.1
Memory CD8 T-cell nTPM: 67.7
Samples: 5
Max nTPM: 83.0
Min nTPM: 47.5
P10809_1012
83.0
P10809_1027
66.7
P10809_1046
74.9
P10809_1065
47.5
P10809_1111
66.2
Naive CD4 T-cell nTPM: 32.9
Samples: 6
Max nTPM: 41.1
Min nTPM: 21.9
P10809_1015
41.1
P10809_1030
23.2
P10809_1049
21.9
P10809_1068
36.8
P10809_1085
35.3
P10809_1112
39.3
Naive CD8 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 54.5
Min nTPM: 30.4
P10809_1016
42.5
P10809_1031
32.0
P10809_1050
40.6
P10809_1069
40.8
P10809_1087
54.5
P10809_1110
30.4
T-reg nTPM: 37.0
Samples: 6
Max nTPM: 52.5
Min nTPM: 21.3
P10809_1018
52.5
P10809_1037
32.9
P10809_1056
21.3
P10809_1075
33.1
P10809_1094
43.6
P10809_1106
38.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
228.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 137.1
Samples: 4
Max nTPM: 180.7
Min nTPM: 100.1
RHH5202_R3573
100.1
RHH5230_R3602
163.4
RHH5259_R3631
180.7
RHH5288_R3660
104.2
Effector memory CD8 T-cell nTPM: 166.3
Samples: 4
Max nTPM: 208.1
Min nTPM: 119.4
RHH5203_R3574
153.3
RHH5231_R3603
119.4
RHH5260_R3632
208.1
RHH5289_R3661
184.2
MAIT T-cell nTPM: 228.2
Samples: 4
Max nTPM: 245.6
Min nTPM: 213.2
RHH5233_R3605
235.2
RHH5205_R3576
245.6
RHH5262_R3634
218.8
RHH5297_R3663
213.2
Memory CD4 T-cell TFH nTPM: 109.7
Samples: 4
Max nTPM: 128.3
Min nTPM: 85.1
RHH5300_R3666
128.3
RHH5236_R3608
106.4
RHH5265_R3637
85.1
RHH5208_R3579
118.8
Memory CD4 T-cell Th1 nTPM: 131.4
Samples: 4
Max nTPM: 166.9
Min nTPM: 109.9
RHH5210_R3581
109.9
RHH5302_R3668
126.0
RHH5238_R3610
166.9
RHH5267_R3639
122.8
Memory CD4 T-cell Th1/Th17 nTPM: 200.6
Samples: 4
Max nTPM: 225.1
Min nTPM: 157.3
RHH5303_R3669
225.1
RHH5211_R3582
208.5
RHH5239_R3611
211.3
RHH5268_R3640
157.3
Memory CD4 T-cell Th17 nTPM: 191.2
Samples: 4
Max nTPM: 256.7
Min nTPM: 156.0
RHH5304_R3670
176.5
RHH5212_R3583
175.5
RHH5240_R3612
256.7
RHH5269_R3641
156.0
Memory CD4 T-cell Th2 nTPM: 170.5
Samples: 4
Max nTPM: 241.9
Min nTPM: 140.0
RHH5305_R3671
155.1
RHH5213_R3584
241.9
RHH5241_R3613
144.8
RHH5270_R3642
140.0
Naive CD4 T-cell nTPM: 72.9
Samples: 4
Max nTPM: 83.2
Min nTPM: 61.5
RHH5306_R3672
78.9
RHH5214_R3585
68.0
RHH5242_R3614
61.5
RHH5271_R3643
83.2
Naive CD8 T-cell nTPM: 95.8
Samples: 4
Max nTPM: 135.9
Min nTPM: 72.4
RHH5201_R3572
97.1
RHH5229_R3601
135.9
RHH5258_R3630
72.4
RHH5287_R3659
77.7
Non-Vd2 gdTCR nTPM: 146.3
Samples: 4
Max nTPM: 165.1
Min nTPM: 121.8
RHH5235_R3607
159.9
RHH5264_R3636
121.8
RHH5207_R3578
138.4
RHH5299_R3665
165.1
T-reg nTPM: 122.7
Samples: 4
Max nTPM: 168.5
Min nTPM: 100.5
RHH5301_R3667
103.8
RHH5237_R3609
168.5
RHH5266_R3638
100.5
RHH5209_R3580
117.8
Terminal effector memory CD4 T-cell nTPM: 182.4
Samples: 2
Max nTPM: 206.6
Min nTPM: 158.1
RHH5243_R3615
206.6
RHH5272_R3644
158.1
Terminal effector memory CD8 T-cell nTPM: 157.6
Samples: 4
Max nTPM: 217.1
Min nTPM: 111.2
RHH5232_R3604
164.7
RHH5204_R3575
111.2
RHH5261_R3633
217.1
RHH5296_R3662
137.5
Vd2 gdTCR nTPM: 166.8
Samples: 4
Max nTPM: 239.6
Min nTPM: 131.4
RHH5234_R3606
152.4
RHH5206_R3577
131.4
RHH5263_R3635
239.6
RHH5298_R3664
143.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
