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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.4
nTPM
Monaco:
26.3
nTPM
Schmiedel:
51.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.4
HPA sample
nTPM
gdT-cell nTPM: 11.9
Samples: 6
Max nTPM: 18.4
Min nTPM: 9.3
P10809_1007
9.6
P10809_1022
13.6
P10809_1041
18.4
P10809_1060
9.4
P10809_1077
11.0
P10809_1098
9.3
MAIT T-cell nTPM: 11.0
Samples: 6
Max nTPM: 15.2
Min nTPM: 6.3
P10809_1006
8.2
P10809_1024
15.2
P10809_1043
11.1
P10809_1062
14.3
P10809_1083
10.8
P10809_1097
6.3
Memory CD4 T-cell nTPM: 10.0
Samples: 6
Max nTPM: 12.5
Min nTPM: 6.3
P10809_1014
9.2
P10809_1026
6.3
P10809_1045
12.5
P10809_1064
11.4
P10809_1086
9.3
P10809_1113
11.3
Memory CD8 T-cell nTPM: 12.1
Samples: 5
Max nTPM: 17.5
Min nTPM: 9.0
P10809_1012
9.0
P10809_1027
17.5
P10809_1046
14.0
P10809_1065
10.0
P10809_1111
10.1
Naive CD4 T-cell nTPM: 9.6
Samples: 6
Max nTPM: 16.3
Min nTPM: 6.0
P10809_1015
7.2
P10809_1030
13.5
P10809_1049
16.3
P10809_1068
6.0
P10809_1085
7.4
P10809_1112
6.9
Naive CD8 T-cell nTPM: 9.2
Samples: 6
Max nTPM: 11.7
Min nTPM: 6.0
P10809_1016
6.6
P10809_1031
11.0
P10809_1050
10.9
P10809_1069
9.2
P10809_1087
11.7
P10809_1110
6.0
T-reg nTPM: 24.4
Samples: 6
Max nTPM: 32.6
Min nTPM: 13.5
P10809_1018
13.5
P10809_1037
27.4
P10809_1056
32.6
P10809_1075
32.3
P10809_1094
22.3
P10809_1106
18.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 15.4
Samples: 4
Max nTPM: 22.6
Min nTPM: 10.5
RHH5202_R3573
22.6
RHH5230_R3602
15.2
RHH5259_R3631
10.5
RHH5288_R3660
13.1
Effector memory CD8 T-cell nTPM: 26.3
Samples: 4
Max nTPM: 32.1
Min nTPM: 20.2
RHH5203_R3574
30.1
RHH5231_R3603
32.1
RHH5260_R3632
22.8
RHH5289_R3661
20.2
MAIT T-cell nTPM: 17.7
Samples: 4
Max nTPM: 19.5
Min nTPM: 14.1
RHH5233_R3605
17.9
RHH5205_R3576
14.1
RHH5262_R3634
19.4
RHH5297_R3663
19.5
Memory CD4 T-cell TFH nTPM: 16.8
Samples: 4
Max nTPM: 21.8
Min nTPM: 11.4
RHH5300_R3666
16.3
RHH5236_R3608
11.4
RHH5265_R3637
17.7
RHH5208_R3579
21.8
Memory CD4 T-cell Th1 nTPM: 13.1
Samples: 4
Max nTPM: 18.0
Min nTPM: 11.4
RHH5210_R3581
11.7
RHH5302_R3668
11.4
RHH5238_R3610
18.0
RHH5267_R3639
11.4
Memory CD4 T-cell Th1/Th17 nTPM: 13.2
Samples: 4
Max nTPM: 19.5
Min nTPM: 8.5
RHH5303_R3669
16.2
RHH5211_R3582
19.5
RHH5239_R3611
8.5
RHH5268_R3640
8.6
Memory CD4 T-cell Th17 nTPM: 19.7
Samples: 4
Max nTPM: 25.8
Min nTPM: 12.8
RHH5304_R3670
12.8
RHH5212_R3583
22.1
RHH5240_R3612
25.8
RHH5269_R3641
18.0
Memory CD4 T-cell Th2 nTPM: 15.2
Samples: 4
Max nTPM: 28.7
Min nTPM: 8.8
RHH5305_R3671
8.8
RHH5213_R3584
28.7
RHH5241_R3613
11.8
RHH5270_R3642
11.3
Naive CD4 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 17.6
Min nTPM: 6.3
RHH5306_R3672
16.5
RHH5214_R3585
12.8
RHH5242_R3614
6.3
RHH5271_R3643
17.6
Naive CD8 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 26.9
Min nTPM: 5.3
RHH5201_R3572
26.9
RHH5229_R3601
5.3
RHH5258_R3630
14.0
RHH5287_R3659
7.0
Non-Vd2 gdTCR nTPM: 18.3
Samples: 4
Max nTPM: 21.8
Min nTPM: 13.9
RHH5235_R3607
21.7
RHH5264_R3636
15.7
RHH5207_R3578
13.9
RHH5299_R3665
21.8
T-reg nTPM: 12.3
Samples: 4
Max nTPM: 13.7
Min nTPM: 10.6
RHH5301_R3667
11.6
RHH5237_R3609
10.6
RHH5266_R3638
13.7
RHH5209_R3580
13.2
Terminal effector memory CD4 T-cell nTPM: 21.8
Samples: 2
Max nTPM: 24.0
Min nTPM: 19.6
RHH5243_R3615
24.0
RHH5272_R3644
19.6
Terminal effector memory CD8 T-cell nTPM: 18.7
Samples: 4
Max nTPM: 22.2
Min nTPM: 13.7
RHH5232_R3604
20.8
RHH5204_R3575
22.2
RHH5261_R3633
13.7
RHH5296_R3662
18.1
Vd2 gdTCR nTPM: 12.4
Samples: 4
Max nTPM: 16.9
Min nTPM: 4.6
RHH5234_R3606
15.5
RHH5206_R3577
16.9
RHH5263_R3635
12.6
RHH5298_R3664
4.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
