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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
549.2
nTPM
FANTOM5:
300.6
Scaled Tags Per Million
Pig:
115.9
nTPM
Allen mouse:
7.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
549.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 549.2
2301
Female, age 85, both hemispheres
672.9
2188
Female, age 91, both hemispheres
654.8
2090
Male, age 80, both hemispheres
496.0
1984
Male, age 76, both hemispheres
373.3
Dorsal cochlear nucleus nTPM: 468.2
2187
Female, age 91, both hemispheres
531.2
2802
Male, age 74, right hemisphere
491.6
2378
Male, age 80, both hemispheres
474.6
2370
Male, age 61, both hemispheres
428.6
2058
Male, age 76, both hemispheres
415.1
Dorsal tegmental nucleus nTPM: 469.8
2083
Male, age 80, both hemispheres
504.2
2326
Male, age 74, both hemispheres
488.2
2358
Male, age 61, both hemispheres
467.6
1936
Male, age 76, left hemisphere
419.0
Dorsolateral tegmental area nTPM: 453.4
2337
Male, age 61, both hemispheres
603.2
2654
Male, age 80, both hemispheres
507.8
2751
Female, age 85, both hemispheres
451.9
2141
Male, age 76, both hemispheres
363.6
2360
Male, age 74, both hemispheres
340.7
Kolliker-Fuse nucleus nTPM: 519.1
2793
Female, age 91, left hemisphere
650.2
2163
Male, age 80, both hemispheres
483.8
2315
Male, age 76, right hemisphere
423.3
Lateral lemniscal nuclei nTPM: 456.4
2320
Female, age 91, left hemisphere
557.0
2036
Male, age 80, both hemispheres
464.6
2169
Male, age 76, both hemispheres
446.4
2746
Female, age 85, left hemisphere
407.3
2453
Male, age 74, right hemisphere
406.8
Lateral parabrachial nucleus nTPM: 475.2
2792
Male, age 76, both hemispheres
575.5
2790
Male, age 61, both hemispheres
482.9
2013
Male, age 80, both hemispheres
445.7
2139
Female, age 85, right hemisphere
396.6
Lateral vestibular nucleus nTPM: 543.0
2311
Male, age 80, both hemispheres
576.0
2184
Male, age 76, both hemispheres
510.0
Locus coeruleus nTPM: 351.6
2720
Male, age 74, both hemispheres
418.9
2162
Male, age 80, both hemispheres
417.3
2317
Female, age 72, unknown
349.8
2014
Male, age 55, unknown
340.0
2123
Female, age 91, both hemispheres
328.6
1980
Male, age 76, both hemispheres
325.5
2788
Male, age 74, unknown
281.0
Medial parabrachial nucleus nTPM: 519.7
2170
Female, age 91, both hemispheres
597.6
2156
Male, age 61, both hemispheres
573.8
2463
Female, age 85, right hemisphere
495.2
2854
Male, age 80, both hemispheres
483.4
2786
Male, age 76, both hemispheres
448.3
Medial periolivary nuclei nTPM: 423.6
2458
Female, age 91, both hemispheres
507.6
2081
Male, age 80, both hemispheres
493.0
2171
Female, age 85, both hemispheres
392.2
2063
Male, age 76, both hemispheres
387.8
2791
Male, age 74, right hemisphere
337.2
Motor facial nucleus nTPM: 453.6
2697
Female, age 85, both hemispheres
539.7
2126
Male, age 61, both hemispheres
487.5
2795
Female, age 91, both hemispheres
464.3
2327
Male, age 80, both hemispheres
437.2
2365
Male, age 74, right hemisphere
407.2
2062
Male, age 76, both hemispheres
385.4
Motor trigeminal nucleus nTPM: 488.7
2321
Female, age 91, both hemispheres
581.0
2335
Male, age 61, both hemispheres
486.6
2309
Male, age 76, both hemispheres
474.3
2560
Male, age 74, both hemispheres
451.9
2079
Male, age 80, both hemispheres
449.6
Nuclei of the trapezoid body nTPM: 420.4
2166
Male, age 80, both hemispheres
504.8
2368
Female, age 91, both hemispheres
486.6
2159
Male, age 61, both hemispheres
409.3
1983
Male, age 76, both hemispheres
370.3
2735
Female, age 85, both hemispheres
330.8
Nucleus raphe magnus nTPM: 413.4
2459
Female, age 91, both hemispheres
480.7
2328
Male, age 80, both hemispheres
468.4
2051
Male, age 76, both hemispheres
458.9
2455
Male, age 74, both hemispheres
390.6
2172
Female, age 85, both hemispheres
347.1
2160
Male, age 61, both hemispheres
335.0
Paramedian reticular nucleus nTPM: 413.3
2052
Male, age 76, both hemispheres
442.6
2057
Male, age 80, both hemispheres
441.1
2050
Female, age 85, both hemispheres
388.0
2313
Male, age 61, both hemispheres
381.6
Pedunculopontine tegmental nucleus nTPM: 419.6
2338
Male, age 61, both hemispheres
482.5
2334
Male, age 80, both hemispheres
444.1
1921
Female, age 85, both hemispheres
332.4
Pontine nuclei nTPM: 431.3
2319
Female, age 91, both hemispheres
535.6
2115
Male, age 80, left hemisphere
508.4
2109
Female, age 72, unknown
458.0
1968
Male, age 76, left hemisphere
447.2
2454
Male, age 74, left hemisphere
433.7
1863
Male, age 55, unknown
428.2
2787
Female, age 85, both hemispheres
371.5
2727
Male, age 61, right hemisphere
268.1
Pontine raphe nucleus nTPM: 352.9
2853
Male, age 76, midline
370.2
2122
Female, age 85, midline
335.6
Posteroventral cochlear nucleus nTPM: 514.9
2135
Female, age 91, both hemispheres
673.5
2341
Male, age 80, both hemispheres
592.8
2371
Male, age 61, both hemispheres
474.4
2070
Male, age 76, both hemispheres
452.8
2752
Female, age 85, both hemispheres
381.0
Principal sensory trigeminal nucleus nTPM: 444.0
2324
Male, age 76, both hemispheres
522.6
2367
Female, age 91, left hemisphere
519.3
2158
Male, age 61, both hemispheres
396.3
2008
Male, age 80, left hemisphere
337.9
Reticular pontine nucleus, caudal nTPM: 480.7
2457
Female, age 91, both hemispheres
544.7
2559
Male, age 74, both hemispheres
492.2
2092
Male, age 76, both hemispheres
465.7
2332
Male, age 80, right hemisphere
420.3
Reticular pontine nucleus, oral nTPM: 468.8
2366
Female, age 91, both hemispheres
581.6
2361
Male, age 74, both hemispheres
476.6
2167
Male, age 76, both hemispheres
459.8
1939
Male, age 80, both hemispheres
433.3
2012
Female, age 85, both hemispheres
392.5
Reticulotegmental nucleus nTPM: 484.1
2322
Female, age 91, both hemispheres
522.9
2452
Male, age 74, both hemispheres
515.2
2333
Male, age 80, both hemispheres
483.1
2325
Male, age 76, both hemispheres
415.2
Spinal trigeminal nucleus, oral nTPM: 417.5
2164
Male, age 80, both hemispheres
522.8
1978
Male, age 76, both hemispheres
400.5
2737
Female, age 85, both hemispheres
329.0
Subcoeruleus area nTPM: 441.7
2369
Female, age 85, left hemisphere
506.4
2451
Male, age 74, both hemispheres
492.4
2089
Male, age 76, left hemisphere
455.0
1958
Male, age 80, both hemispheres
401.5
2323
Female, age 91, left hemisphere
353.0
Superior olive nTPM: 450.1
2561
Female, age 91, both hemispheres
538.0
2020
Male, age 76, both hemispheres
492.9
2329
Male, age 80, right hemisphere
491.5
2364
Male, age 74, right hemisphere
380.6
1875
Female, age 85, both hemispheres
347.6
Ventral periolivary nuclei nTPM: 432.1
2023
Male, age 76, both hemispheres
462.5
2794
Female, age 91, left hemisphere
445.6
2165
Male, age 80, both hemispheres
440.1
2130
Female, age 85, both hemispheres
380.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 437.5
2456
Female, age 91, both hemispheres
496.1
2161
Male, age 80, both hemispheres
469.4
2840
Female, age 85, both hemispheres
440.0
1959
Male, age 76, both hemispheres
420.2
2359
Male, age 61, both hemispheres
409.4
2449
Male, age 74, both hemispheres
390.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
115.9
Pig sample
Sample description
nTPM
Pons nTPM: 115.9
Samples: 4
Max nTPM: 123.5
Min nTPM: 111.6
Sample A
Female
116.3
Sample B
Female
112.1
Sample C
Male
111.6
Sample D
Male
123.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
