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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.5
nTPM
Monaco:
118.8
nTPM
Schmiedel:
67.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.5
HPA sample
nTPM
gdT-cell nTPM: 98.8
Samples: 6
Max nTPM: 116.3
Min nTPM: 81.2
P10809_1007
81.2
P10809_1022
100.8
P10809_1041
116.3
P10809_1060
89.2
P10809_1077
101.3
P10809_1098
103.8
MAIT T-cell nTPM: 113.3
Samples: 6
Max nTPM: 126.3
Min nTPM: 91.9
P10809_1006
91.9
P10809_1024
126.3
P10809_1043
120.1
P10809_1062
118.6
P10809_1083
112.6
P10809_1097
110.1
Memory CD4 T-cell nTPM: 95.4
Samples: 6
Max nTPM: 109.2
Min nTPM: 83.2
P10809_1014
83.7
P10809_1026
83.2
P10809_1045
109.2
P10809_1064
99.2
P10809_1086
102.0
P10809_1113
95.1
Memory CD8 T-cell nTPM: 98.2
Samples: 5
Max nTPM: 111.3
Min nTPM: 90.0
P10809_1012
90.0
P10809_1027
93.2
P10809_1046
100.7
P10809_1065
111.3
P10809_1111
95.6
Naive CD4 T-cell nTPM: 101.4
Samples: 6
Max nTPM: 115.7
Min nTPM: 83.8
P10809_1015
83.8
P10809_1030
90.5
P10809_1049
115.7
P10809_1068
107.2
P10809_1085
111.8
P10809_1112
99.2
Naive CD8 T-cell nTPM: 115.5
Samples: 6
Max nTPM: 147.6
Min nTPM: 87.4
P10809_1016
87.4
P10809_1031
108.6
P10809_1050
106.6
P10809_1069
147.6
P10809_1087
113.8
P10809_1110
128.7
T-reg nTPM: 110.5
Samples: 6
Max nTPM: 164.4
Min nTPM: 86.1
P10809_1018
95.8
P10809_1037
109.7
P10809_1056
111.9
P10809_1075
95.2
P10809_1094
164.4
P10809_1106
86.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 82.5
Samples: 4
Max nTPM: 94.7
Min nTPM: 61.9
RHH5202_R3573
90.5
RHH5230_R3602
83.0
RHH5259_R3631
61.9
RHH5288_R3660
94.7
Effector memory CD8 T-cell nTPM: 118.9
Samples: 4
Max nTPM: 144.3
Min nTPM: 97.5
RHH5203_R3574
144.3
RHH5231_R3603
105.7
RHH5260_R3632
97.5
RHH5289_R3661
127.9
MAIT T-cell nTPM: 94.0
Samples: 4
Max nTPM: 114.8
Min nTPM: 72.8
RHH5233_R3605
93.3
RHH5205_R3576
72.8
RHH5262_R3634
114.8
RHH5297_R3663
95.1
Memory CD4 T-cell TFH nTPM: 98.3
Samples: 4
Max nTPM: 106.9
Min nTPM: 86.8
RHH5300_R3666
86.8
RHH5236_R3608
98.5
RHH5265_R3637
106.9
RHH5208_R3579
101.1
Memory CD4 T-cell Th1 nTPM: 79.4
Samples: 4
Max nTPM: 94.5
Min nTPM: 58.2
RHH5210_R3581
81.4
RHH5302_R3668
94.5
RHH5238_R3610
58.2
RHH5267_R3639
83.5
Memory CD4 T-cell Th1/Th17 nTPM: 88.4
Samples: 4
Max nTPM: 120.4
Min nTPM: 34.5
RHH5303_R3669
115.6
RHH5211_R3582
120.4
RHH5239_R3611
34.5
RHH5268_R3640
82.9
Memory CD4 T-cell Th17 nTPM: 94.9
Samples: 4
Max nTPM: 114.4
Min nTPM: 83.6
RHH5304_R3670
94.1
RHH5212_R3583
87.3
RHH5240_R3612
114.4
RHH5269_R3641
83.6
Memory CD4 T-cell Th2 nTPM: 96.7
Samples: 4
Max nTPM: 120.1
Min nTPM: 80.5
RHH5305_R3671
100.6
RHH5213_R3584
120.1
RHH5241_R3613
85.4
RHH5270_R3642
80.5
Naive CD4 T-cell nTPM: 81.2
Samples: 4
Max nTPM: 89.7
Min nTPM: 75.0
RHH5306_R3672
77.2
RHH5214_R3585
89.7
RHH5242_R3614
75.0
RHH5271_R3643
83.0
Naive CD8 T-cell nTPM: 90.1
Samples: 4
Max nTPM: 117.8
Min nTPM: 42.6
RHH5201_R3572
105.9
RHH5229_R3601
42.6
RHH5258_R3630
117.8
RHH5287_R3659
94.0
Non-Vd2 gdTCR nTPM: 100.2
Samples: 4
Max nTPM: 143.1
Min nTPM: 57.5
RHH5235_R3607
57.5
RHH5264_R3636
143.1
RHH5207_R3578
108.1
RHH5299_R3665
92.0
T-reg nTPM: 86.2
Samples: 4
Max nTPM: 91.3
Min nTPM: 78.5
RHH5301_R3667
85.1
RHH5237_R3609
89.8
RHH5266_R3638
91.3
RHH5209_R3580
78.5
Terminal effector memory CD4 T-cell nTPM: 81.8
Samples: 2
Max nTPM: 96.9
Min nTPM: 66.7
RHH5243_R3615
66.7
RHH5272_R3644
96.9
Terminal effector memory CD8 T-cell nTPM: 100.3
Samples: 4
Max nTPM: 105.0
Min nTPM: 93.1
RHH5232_R3604
103.6
RHH5204_R3575
99.6
RHH5261_R3633
93.1
RHH5296_R3662
105.0
Vd2 gdTCR nTPM: 97.6
Samples: 4
Max nTPM: 111.0
Min nTPM: 76.6
RHH5234_R3606
111.0
RHH5206_R3577
101.3
RHH5263_R3635
101.5
RHH5298_R3664
76.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
