HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:42.3 nTPM
HPA Brain:169.9 nTPM
GTEx:42.3 nTPM
FANTOM5:35.5 Scaled Tags Per Million
Pig:60.0 nTPM
Mouse:56.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041954
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 169.9
Sample id Sample description nTPM
Hippocampus
nTPM: 134.9
2621 Female, age 67, right hemisphere 162.1
2529 Female, age 94, left hemisphere 152.3
2148 Female, age 91, left hemisphere 134.6
1911 Female, age 85, right hemisphere 122.5
1855 Male, age 76, left hemisphere 119.7
1898 Male, age 80, left hemisphere 118.1
Dentate gyrus
nTPM: 124.7
2531 Female, age 67, both hemispheres 160.8
2530 Female, age 94, left hemisphere 132.3
1927 Female, age 91, both hemispheres 125.6
2246 Female, age 85, both hemispheres 120.5
2528 Male, age 74, both hemispheres 109.9
2010 Male, age 76, both hemispheres 99.0
Entorhinal gyrus
nTPM: 169.9
2613 Female, age 94, left hemisphere 225.2
2686 Male, age 75, right hemisphere 205.1
2764 Male, age 80, right hemisphere 168.1
1938 Female, age 85, left hemisphere 144.0
1787 Male, age 76, left hemisphere 141.8
2117 Female, age 91, right hemisphere 134.9
Hippocampus, CA1
nTPM: 116.2
2082 Female, age 91, right hemisphere 144.1
2527 Male, age 74, both hemispheres 124.0
1873 Female, age 85, both hemispheres 113.1
2749 Male, age 80, left hemisphere 104.0
2045 Male, age 76, both hemispheres 95.6
Hippocampus, CA2
nTPM: 128.2
2437 Female, age 94, left hemisphere 152.2
2113 Female, age 91, right hemisphere 149.1
1940 Female, age 85, left hemisphere 131.6
1963 Male, age 80, left hemisphere 125.6
1892 Male, age 76, both hemispheres 119.0
2249 Male, age 74, both hemispheres 91.9
Hippocampus, CA3
nTPM: 130.3
2861 Female, age 67, both hemispheres 199.6
2620 Female, age 94, left hemisphere 141.1
1891 Female, age 85, both hemispheres 117.9
2137 Male, age 80, left hemisphere 117.1
1867 Male, age 76, both hemispheres 116.3
2436 Male, age 74, both hemispheres 89.7
Parahippocampal cortex
nTPM: 155.6
2622 Female, age 67, right hemisphere 233.1
2692 Male, age 74, both hemispheres 176.1
2693 Female, age 94, both hemispheres 158.1
2245 Female, age 91, both hemispheres 152.1
1990 Female, age 91, right hemisphere 150.6
2532 Female, age 72, left hemisphere 144.5
1933 Female, age 85, both hemispheres 138.5
1850 Male, age 80, both hemispheres 138.0
2250 Female, age 67, right hemisphere 136.2
2018 Male, age 76, both hemispheres 129.1
Perirhinal gyrus
nTPM: 139.8
1847 Female, age 91, left hemisphere 154.5
1794 Male, age 80, right hemisphere 147.0
2848 Male, age 76, right hemisphere 134.3
1841 Female, age 85, right hemisphere 131.9
2521 Female, age 94, right hemisphere 131.3
Subiculum
nTPM: 134.5
2619 Male, age 74, both hemispheres 161.2
2438 Female, age 94, left hemisphere 141.2
2042 Male, age 76, both hemispheres 132.3
1977 Female, age 85, both hemispheres 127.6
2729 Female, age 91, right hemisphere 127.1
1901 Male, age 80, both hemispheres 117.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.3
Samples: 197

Max nTPM: 104.2
Min nTPM: 8.6
Std nTPM: 17.4
Median nTPM: 38.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 104.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 89.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 88.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 87.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 83.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 81.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 80.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 78.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 77.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 76.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.5
FF:10153-102I9 76 years, female 55.5
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.0
Pig sample Sample description nTPM
Subiculum
nTPM: 45.0
Samples: 4

Max nTPM: 56.8
Min nTPM: 36.0
Sample A Female 56.8
Sample B Female 42.0
Sample C Male 45.3
Sample D Male 36.0
Dorsal hippocampus
nTPM: 60.0
Samples: 4

Max nTPM: 69.2
Min nTPM: 52.2
Sample A Female 69.2
Sample B Female 63.9
Sample C Male 54.7
Sample D Male 52.2
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 54.9
Min nTPM: 44.9
Sample A Female 54.9
Sample B Female 44.9
Sample C Male 54.9
Sample D Male 46.6
Ventral hippocampus
nTPM: 57.1
Samples: 4

Max nTPM: 69.1
Min nTPM: 40.6
Sample A Female 52.1
Sample B Female 40.6
Sample C Male 66.4
Sample D Male 69.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.0
Samples: 4

Max nTPM: 64.1
Min nTPM: 46.5
Sample A Male 63.2
Sample B Male 64.1
Sample C Female 50.1
Sample D Female 46.5
Hippocampal formation
nTPM: 47.2
Samples: 4

Max nTPM: 52.3
Min nTPM: 41.5
Sample A Male 48.7
Sample B Male 52.3
Sample C Female 41.5
Sample D Female 46.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
74056144 Antisense, RP_051019_03_E12, Mouse strain C57BL/6J (56 days, male) 0.9

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