HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:50.2 nTPM
HPA Brain:54.3 nTPM
GTEx:50.2 nTPM
FANTOM5:87.2 Scaled Tags Per Million
Pig:86.2 nTPM
Mouse:66.0 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037773
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 52.5
1898 Male, age 80, left hemisphere 59.9
2529 Female, age 94, left hemisphere 56.8
1911 Female, age 85, right hemisphere 53.3
1855 Male, age 76, left hemisphere 49.8
2621 Female, age 67, right hemisphere 48.6
2148 Female, age 91, left hemisphere 46.4
Dentate gyrus
nTPM: 48.1
2010 Male, age 76, both hemispheres 52.3
1927 Female, age 91, both hemispheres 49.0
2530 Female, age 94, left hemisphere 48.8
2531 Female, age 67, both hemispheres 47.3
2246 Female, age 85, both hemispheres 46.2
2528 Male, age 74, both hemispheres 45.1
Entorhinal gyrus
nTPM: 52.7
1938 Female, age 85, left hemisphere 59.2
2117 Female, age 91, right hemisphere 55.9
2686 Male, age 75, right hemisphere 55.7
2764 Male, age 80, right hemisphere 52.7
1787 Male, age 76, left hemisphere 49.5
2613 Female, age 94, left hemisphere 43.0
Hippocampus, CA1
nTPM: 50.8
2749 Male, age 80, left hemisphere 55.1
1873 Female, age 85, both hemispheres 53.1
2082 Female, age 91, right hemisphere 50.5
2527 Male, age 74, both hemispheres 48.1
2045 Male, age 76, both hemispheres 47.1
Hippocampus, CA2
nTPM: 49.3
1963 Male, age 80, left hemisphere 53.4
1892 Male, age 76, both hemispheres 52.7
2249 Male, age 74, both hemispheres 48.4
2437 Female, age 94, left hemisphere 47.7
1940 Female, age 85, left hemisphere 46.9
2113 Female, age 91, right hemisphere 46.6
Hippocampus, CA3
nTPM: 49.7
1891 Female, age 85, both hemispheres 55.9
1867 Male, age 76, both hemispheres 54.7
2137 Male, age 80, left hemisphere 54.7
2436 Male, age 74, both hemispheres 45.5
2620 Female, age 94, left hemisphere 44.1
2861 Female, age 67, both hemispheres 43.0
Parahippocampal cortex
nTPM: 51.8
1850 Male, age 80, both hemispheres 61.7
1933 Female, age 85, both hemispheres 55.4
1990 Female, age 91, right hemisphere 54.1
2692 Male, age 74, both hemispheres 51.7
2622 Female, age 67, right hemisphere 50.9
2018 Male, age 76, both hemispheres 50.5
2532 Female, age 72, left hemisphere 49.9
2693 Female, age 94, both hemispheres 48.7
2245 Female, age 91, both hemispheres 47.8
2250 Female, age 67, right hemisphere 47.7
Perirhinal gyrus
nTPM: 54.3
1841 Female, age 85, right hemisphere 60.2
1794 Male, age 80, right hemisphere 57.5
1847 Female, age 91, left hemisphere 55.4
2848 Male, age 76, right hemisphere 50.3
2521 Female, age 94, right hemisphere 48.0
Subiculum
nTPM: 53.7
2042 Male, age 76, both hemispheres 57.5
2438 Female, age 94, left hemisphere 57.1
1977 Female, age 85, both hemispheres 56.8
1901 Male, age 80, both hemispheres 55.4
2619 Male, age 74, both hemispheres 48.2
2729 Female, age 91, right hemisphere 47.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.2
Samples: 197

Max nTPM: 115.5
Min nTPM: 33.6
Std nTPM: 11.3
Median nTPM: 47.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 115.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 90.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 88.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 79.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 76.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 76.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 74.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 73.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 72.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 71.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 71.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.2
FF:10153-102I9 76 years, female 92.3
FF:10169-103B7 60 years, female 82.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.2
Pig sample Sample description nTPM
Subiculum
nTPM: 78.4
Samples: 4

Max nTPM: 96.3
Min nTPM: 70.6
Sample A Female 96.3
Sample B Female 70.6
Sample C Male 71.5
Sample D Male 75.2
Dorsal hippocampus
nTPM: 86.2
Samples: 4

Max nTPM: 98.5
Min nTPM: 73.1
Sample A Female 98.5
Sample B Female 79.5
Sample C Male 93.8
Sample D Male 73.1
Entorhinal cortex
nTPM: 76.8
Samples: 4

Max nTPM: 83.9
Min nTPM: 69.5
Sample A Female 77.2
Sample B Female 83.9
Sample C Male 76.4
Sample D Male 69.5
Ventral hippocampus
nTPM: 74.8
Samples: 4

Max nTPM: 83.0
Min nTPM: 65.4
Sample A Female 82.7
Sample B Female 65.4
Sample C Male 68.0
Sample D Male 83.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 66.4
Min nTPM: 62.5
Sample A Male 63.2
Sample B Male 66.4
Sample C Female 62.5
Sample D Female 65.5
Hippocampal formation
nTPM: 66.1
Samples: 4

Max nTPM: 70.1
Min nTPM: 59.3
Sample A Male 70.1
Sample B Male 67.4
Sample C Female 67.4
Sample D Female 59.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
532735 Antisense, RP_040825_01_H09, Mouse strain C57BL/6J (56 days, male) 1.5

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