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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.1
nTPM
Monaco:
154.1
nTPM
Schmiedel:
231.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.1
HPA sample
nTPM
gdT-cell nTPM: 59.7
Samples: 6
Max nTPM: 73.1
Min nTPM: 41.2
P10809_1007
41.2
P10809_1022
73.1
P10809_1041
64.1
P10809_1060
62.8
P10809_1077
54.6
P10809_1098
62.3
MAIT T-cell nTPM: 76.4
Samples: 6
Max nTPM: 121.2
Min nTPM: 56.0
P10809_1006
69.1
P10809_1024
121.2
P10809_1043
69.8
P10809_1062
70.7
P10809_1083
56.0
P10809_1097
71.5
Memory CD4 T-cell nTPM: 72.3
Samples: 6
Max nTPM: 85.0
Min nTPM: 63.0
P10809_1014
63.0
P10809_1026
72.5
P10809_1045
85.0
P10809_1064
66.9
P10809_1086
70.7
P10809_1113
75.5
Memory CD8 T-cell nTPM: 72.6
Samples: 5
Max nTPM: 85.1
Min nTPM: 63.2
P10809_1012
65.0
P10809_1027
67.9
P10809_1046
63.2
P10809_1065
81.7
P10809_1111
85.1
Naive CD4 T-cell nTPM: 78.7
Samples: 6
Max nTPM: 93.0
Min nTPM: 58.5
P10809_1015
58.5
P10809_1030
86.1
P10809_1049
93.0
P10809_1068
85.1
P10809_1085
76.8
P10809_1112
72.7
Naive CD8 T-cell nTPM: 74.1
Samples: 6
Max nTPM: 92.6
Min nTPM: 53.3
P10809_1016
53.3
P10809_1031
92.6
P10809_1050
71.6
P10809_1069
73.1
P10809_1087
75.4
P10809_1110
78.3
T-reg nTPM: 85.2
Samples: 6
Max nTPM: 95.7
Min nTPM: 68.1
P10809_1018
68.1
P10809_1037
92.7
P10809_1056
91.9
P10809_1075
70.3
P10809_1094
92.2
P10809_1106
95.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 136.4
Samples: 4
Max nTPM: 171.8
Min nTPM: 115.3
RHH5202_R3573
119.7
RHH5230_R3602
138.9
RHH5259_R3631
171.8
RHH5288_R3660
115.3
Effector memory CD8 T-cell nTPM: 141.9
Samples: 4
Max nTPM: 167.6
Min nTPM: 106.0
RHH5203_R3574
144.7
RHH5231_R3603
106.0
RHH5260_R3632
167.6
RHH5289_R3661
149.4
MAIT T-cell nTPM: 150.8
Samples: 4
Max nTPM: 181.4
Min nTPM: 120.9
RHH5233_R3605
149.6
RHH5205_R3576
181.4
RHH5262_R3634
151.1
RHH5297_R3663
120.9
Memory CD4 T-cell TFH nTPM: 151.9
Samples: 4
Max nTPM: 174.2
Min nTPM: 114.5
RHH5300_R3666
114.5
RHH5236_R3608
174.2
RHH5265_R3637
149.5
RHH5208_R3579
169.4
Memory CD4 T-cell Th1 nTPM: 122.2
Samples: 4
Max nTPM: 134.9
Min nTPM: 94.7
RHH5210_R3581
130.0
RHH5302_R3668
94.7
RHH5238_R3610
129.2
RHH5267_R3639
134.9
Memory CD4 T-cell Th1/Th17 nTPM: 152.3
Samples: 4
Max nTPM: 170.1
Min nTPM: 139.6
RHH5303_R3669
139.6
RHH5211_R3582
170.1
RHH5239_R3611
145.3
RHH5268_R3640
154.2
Memory CD4 T-cell Th17 nTPM: 147.4
Samples: 4
Max nTPM: 165.5
Min nTPM: 137.7
RHH5304_R3670
139.8
RHH5212_R3583
146.4
RHH5240_R3612
165.5
RHH5269_R3641
137.7
Memory CD4 T-cell Th2 nTPM: 131.2
Samples: 4
Max nTPM: 151.0
Min nTPM: 117.3
RHH5305_R3671
128.2
RHH5213_R3584
151.0
RHH5241_R3613
128.3
RHH5270_R3642
117.3
Naive CD4 T-cell nTPM: 136.7
Samples: 4
Max nTPM: 155.7
Min nTPM: 101.0
RHH5306_R3672
101.0
RHH5214_R3585
146.8
RHH5242_R3614
143.2
RHH5271_R3643
155.7
Naive CD8 T-cell nTPM: 154.1
Samples: 4
Max nTPM: 182.8
Min nTPM: 136.1
RHH5201_R3572
182.8
RHH5229_R3601
136.1
RHH5258_R3630
152.1
RHH5287_R3659
145.3
Non-Vd2 gdTCR nTPM: 128.5
Samples: 4
Max nTPM: 146.1
Min nTPM: 95.0
RHH5235_R3607
137.0
RHH5264_R3636
135.7
RHH5207_R3578
146.1
RHH5299_R3665
95.0
T-reg nTPM: 147.2
Samples: 4
Max nTPM: 178.4
Min nTPM: 117.3
RHH5301_R3667
117.3
RHH5237_R3609
178.4
RHH5266_R3638
143.6
RHH5209_R3580
149.6
Terminal effector memory CD4 T-cell nTPM: 123.4
Samples: 2
Max nTPM: 125.8
Min nTPM: 120.9
RHH5243_R3615
125.8
RHH5272_R3644
120.9
Terminal effector memory CD8 T-cell nTPM: 128.0
Samples: 4
Max nTPM: 149.9
Min nTPM: 109.5
RHH5232_R3604
109.5
RHH5204_R3575
131.4
RHH5261_R3633
149.9
RHH5296_R3662
121.3
Vd2 gdTCR nTPM: 134.3
Samples: 4
Max nTPM: 158.9
Min nTPM: 106.5
RHH5234_R3606
139.5
RHH5206_R3577
132.3
RHH5263_R3635
158.9
RHH5298_R3664
106.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
