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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.6
nTPM
Monaco:
220.4
nTPM
Schmiedel:
198.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.6
HPA sample
nTPM
gdT-cell nTPM: 47.2
Samples: 6
Max nTPM: 52.1
Min nTPM: 42.0
P10809_1007
50.9
P10809_1022
49.1
P10809_1041
46.3
P10809_1060
42.5
P10809_1077
42.0
P10809_1098
52.1
MAIT T-cell nTPM: 62.0
Samples: 6
Max nTPM: 73.3
Min nTPM: 50.1
P10809_1006
73.3
P10809_1024
54.6
P10809_1043
72.8
P10809_1062
64.6
P10809_1083
50.1
P10809_1097
56.5
Memory CD4 T-cell nTPM: 56.7
Samples: 6
Max nTPM: 71.2
Min nTPM: 44.2
P10809_1014
71.2
P10809_1026
47.3
P10809_1045
63.8
P10809_1064
44.2
P10809_1086
50.9
P10809_1113
62.5
Memory CD8 T-cell nTPM: 45.1
Samples: 5
Max nTPM: 57.7
Min nTPM: 34.9
P10809_1012
57.7
P10809_1027
34.9
P10809_1046
53.9
P10809_1065
36.2
P10809_1111
42.9
Naive CD4 T-cell nTPM: 59.4
Samples: 6
Max nTPM: 72.5
Min nTPM: 52.0
P10809_1015
66.2
P10809_1030
53.1
P10809_1049
55.8
P10809_1068
56.8
P10809_1085
72.5
P10809_1112
52.0
Naive CD8 T-cell nTPM: 48.0
Samples: 6
Max nTPM: 67.6
Min nTPM: 36.3
P10809_1016
67.6
P10809_1031
36.3
P10809_1050
51.5
P10809_1069
45.3
P10809_1087
40.1
P10809_1110
47.4
T-reg nTPM: 63.6
Samples: 6
Max nTPM: 72.9
Min nTPM: 55.0
P10809_1018
68.5
P10809_1037
58.6
P10809_1056
65.2
P10809_1075
55.0
P10809_1094
72.9
P10809_1106
61.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
220.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 166.7
Samples: 4
Max nTPM: 200.4
Min nTPM: 152.4
RHH5202_R3573
200.4
RHH5230_R3602
152.4
RHH5259_R3631
160.1
RHH5288_R3660
153.9
Effector memory CD8 T-cell nTPM: 170.9
Samples: 4
Max nTPM: 207.5
Min nTPM: 148.5
RHH5203_R3574
174.0
RHH5231_R3603
148.5
RHH5260_R3632
207.5
RHH5289_R3661
153.4
MAIT T-cell nTPM: 162.3
Samples: 4
Max nTPM: 197.2
Min nTPM: 134.3
RHH5233_R3605
174.4
RHH5205_R3576
197.2
RHH5262_R3634
143.2
RHH5297_R3663
134.3
Memory CD4 T-cell TFH nTPM: 168.0
Samples: 4
Max nTPM: 202.1
Min nTPM: 144.9
RHH5300_R3666
151.8
RHH5236_R3608
144.9
RHH5265_R3637
173.1
RHH5208_R3579
202.1
Memory CD4 T-cell Th1 nTPM: 156.3
Samples: 4
Max nTPM: 188.9
Min nTPM: 118.6
RHH5210_R3581
163.0
RHH5302_R3668
118.6
RHH5238_R3610
188.9
RHH5267_R3639
154.6
Memory CD4 T-cell Th1/Th17 nTPM: 191.7
Samples: 4
Max nTPM: 219.7
Min nTPM: 167.9
RHH5303_R3669
178.4
RHH5211_R3582
200.8
RHH5239_R3611
219.7
RHH5268_R3640
167.9
Memory CD4 T-cell Th17 nTPM: 220.4
Samples: 4
Max nTPM: 266.7
Min nTPM: 192.2
RHH5304_R3670
218.7
RHH5212_R3583
192.2
RHH5240_R3612
266.7
RHH5269_R3641
204.1
Memory CD4 T-cell Th2 nTPM: 192.6
Samples: 4
Max nTPM: 218.6
Min nTPM: 156.5
RHH5305_R3671
156.5
RHH5213_R3584
218.6
RHH5241_R3613
210.0
RHH5270_R3642
185.1
Naive CD4 T-cell nTPM: 158.8
Samples: 4
Max nTPM: 181.0
Min nTPM: 143.5
RHH5306_R3672
149.9
RHH5214_R3585
143.5
RHH5242_R3614
160.8
RHH5271_R3643
181.0
Naive CD8 T-cell nTPM: 148.5
Samples: 4
Max nTPM: 191.9
Min nTPM: 104.2
RHH5201_R3572
161.8
RHH5229_R3601
191.9
RHH5258_R3630
136.1
RHH5287_R3659
104.2
Non-Vd2 gdTCR nTPM: 159.4
Samples: 4
Max nTPM: 208.4
Min nTPM: 128.1
RHH5235_R3607
134.5
RHH5264_R3636
166.4
RHH5207_R3578
208.4
RHH5299_R3665
128.1
T-reg nTPM: 147.7
Samples: 4
Max nTPM: 161.9
Min nTPM: 114.2
RHH5301_R3667
114.2
RHH5237_R3609
161.0
RHH5266_R3638
161.9
RHH5209_R3580
153.8
Terminal effector memory CD4 T-cell nTPM: 163.1
Samples: 2
Max nTPM: 168.7
Min nTPM: 157.5
RHH5243_R3615
157.5
RHH5272_R3644
168.7
Terminal effector memory CD8 T-cell nTPM: 166.7
Samples: 4
Max nTPM: 202.2
Min nTPM: 141.9
RHH5232_R3604
161.7
RHH5204_R3575
141.9
RHH5261_R3633
161.0
RHH5296_R3662
202.2
Vd2 gdTCR nTPM: 151.2
Samples: 4
Max nTPM: 188.5
Min nTPM: 91.9
RHH5234_R3606
171.1
RHH5206_R3577
153.4
RHH5263_R3635
188.5
RHH5298_R3664
91.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
