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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.7
nTPM
Monaco:
141.5
nTPM
Schmiedel:
93.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.7
HPA sample
nTPM
gdT-cell nTPM: 42.1
Samples: 6
Max nTPM: 52.7
Min nTPM: 30.9
P10809_1007
30.9
P10809_1022
52.7
P10809_1041
36.2
P10809_1060
42.7
P10809_1077
39.9
P10809_1098
50.2
MAIT T-cell nTPM: 51.7
Samples: 6
Max nTPM: 73.0
Min nTPM: 37.4
P10809_1006
50.7
P10809_1024
73.0
P10809_1043
52.0
P10809_1062
51.1
P10809_1083
37.4
P10809_1097
46.2
Memory CD4 T-cell nTPM: 37.9
Samples: 6
Max nTPM: 48.0
Min nTPM: 29.1
P10809_1014
29.1
P10809_1026
37.1
P10809_1045
48.0
P10809_1064
35.2
P10809_1086
38.7
P10809_1113
39.2
Memory CD8 T-cell nTPM: 40.7
Samples: 5
Max nTPM: 53.8
Min nTPM: 32.3
P10809_1012
35.3
P10809_1027
42.7
P10809_1046
53.8
P10809_1065
32.3
P10809_1111
39.2
Naive CD4 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 31.5
Min nTPM: 14.8
P10809_1015
14.8
P10809_1030
27.7
P10809_1049
25.7
P10809_1068
25.0
P10809_1085
31.5
P10809_1112
19.1
Naive CD8 T-cell nTPM: 27.2
Samples: 6
Max nTPM: 39.0
Min nTPM: 18.1
P10809_1016
18.1
P10809_1031
22.0
P10809_1050
39.0
P10809_1069
31.3
P10809_1087
31.1
P10809_1110
21.9
T-reg nTPM: 27.3
Samples: 6
Max nTPM: 38.8
Min nTPM: 14.7
P10809_1018
32.1
P10809_1037
23.3
P10809_1056
25.8
P10809_1075
14.7
P10809_1094
38.8
P10809_1106
28.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 110.9
Samples: 4
Max nTPM: 125.5
Min nTPM: 76.5
RHH5202_R3573
116.5
RHH5230_R3602
124.9
RHH5259_R3631
125.5
RHH5288_R3660
76.5
Effector memory CD8 T-cell nTPM: 132.1
Samples: 4
Max nTPM: 151.2
Min nTPM: 104.3
RHH5203_R3574
104.3
RHH5231_R3603
121.9
RHH5260_R3632
150.9
RHH5289_R3661
151.2
MAIT T-cell nTPM: 141.5
Samples: 4
Max nTPM: 155.4
Min nTPM: 118.6
RHH5233_R3605
140.0
RHH5205_R3576
155.4
RHH5262_R3634
151.9
RHH5297_R3663
118.6
Memory CD4 T-cell TFH nTPM: 94.6
Samples: 4
Max nTPM: 102.5
Min nTPM: 85.2
RHH5300_R3666
102.5
RHH5236_R3608
97.0
RHH5265_R3637
93.6
RHH5208_R3579
85.2
Memory CD4 T-cell Th1 nTPM: 88.1
Samples: 4
Max nTPM: 112.8
Min nTPM: 58.8
RHH5210_R3581
58.8
RHH5302_R3668
77.5
RHH5238_R3610
112.8
RHH5267_R3639
103.3
Memory CD4 T-cell Th1/Th17 nTPM: 127.3
Samples: 4
Max nTPM: 149.2
Min nTPM: 91.0
RHH5303_R3669
135.5
RHH5211_R3582
133.6
RHH5239_R3611
149.2
RHH5268_R3640
91.0
Memory CD4 T-cell Th17 nTPM: 112.6
Samples: 4
Max nTPM: 118.5
Min nTPM: 98.0
RHH5304_R3670
117.0
RHH5212_R3583
98.0
RHH5240_R3612
116.8
RHH5269_R3641
118.5
Memory CD4 T-cell Th2 nTPM: 100.3
Samples: 4
Max nTPM: 118.3
Min nTPM: 78.4
RHH5305_R3671
94.4
RHH5213_R3584
118.3
RHH5241_R3613
78.4
RHH5270_R3642
110.1
Naive CD4 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 81.8
Min nTPM: 57.4
RHH5306_R3672
63.9
RHH5214_R3585
61.7
RHH5242_R3614
57.4
RHH5271_R3643
81.8
Naive CD8 T-cell nTPM: 65.1
Samples: 4
Max nTPM: 82.9
Min nTPM: 53.7
RHH5201_R3572
53.7
RHH5229_R3601
61.8
RHH5258_R3630
82.9
RHH5287_R3659
62.1
Non-Vd2 gdTCR nTPM: 134.1
Samples: 4
Max nTPM: 166.2
Min nTPM: 114.5
RHH5235_R3607
129.3
RHH5264_R3636
126.2
RHH5207_R3578
166.2
RHH5299_R3665
114.5
T-reg nTPM: 79.3
Samples: 4
Max nTPM: 91.5
Min nTPM: 67.4
RHH5301_R3667
67.4
RHH5237_R3609
86.2
RHH5266_R3638
91.5
RHH5209_R3580
72.1
Terminal effector memory CD4 T-cell nTPM: 111.7
Samples: 2
Max nTPM: 117.1
Min nTPM: 106.2
RHH5243_R3615
117.1
RHH5272_R3644
106.2
Terminal effector memory CD8 T-cell nTPM: 129.1
Samples: 4
Max nTPM: 151.2
Min nTPM: 97.9
RHH5232_R3604
151.2
RHH5204_R3575
97.9
RHH5261_R3633
125.3
RHH5296_R3662
141.9
Vd2 gdTCR nTPM: 115.9
Samples: 4
Max nTPM: 152.9
Min nTPM: 82.3
RHH5234_R3606
119.9
RHH5206_R3577
108.3
RHH5263_R3635
152.9
RHH5298_R3664
82.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
