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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
159.6
nTPM
Monaco:
576.1
nTPM
Schmiedel:
497.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
159.6
HPA sample
nTPM
gdT-cell nTPM: 105.2
Samples: 6
Max nTPM: 155.1
Min nTPM: 73.4
P10809_1007
88.6
P10809_1022
105.4
P10809_1041
118.3
P10809_1060
73.4
P10809_1077
90.5
P10809_1098
155.1
MAIT T-cell nTPM: 152.7
Samples: 6
Max nTPM: 227.2
Min nTPM: 103.8
P10809_1006
156.5
P10809_1024
149.8
P10809_1043
143.3
P10809_1062
135.4
P10809_1083
103.8
P10809_1097
227.2
Memory CD4 T-cell nTPM: 127.3
Samples: 6
Max nTPM: 176.6
Min nTPM: 101.0
P10809_1014
120.9
P10809_1026
109.4
P10809_1045
149.9
P10809_1064
101.0
P10809_1086
105.8
P10809_1113
176.6
Memory CD8 T-cell nTPM: 116.2
Samples: 5
Max nTPM: 176.5
Min nTPM: 92.3
P10809_1012
117.5
P10809_1027
92.3
P10809_1046
100.8
P10809_1065
94.0
P10809_1111
176.5
Naive CD4 T-cell nTPM: 159.6
Samples: 6
Max nTPM: 188.3
Min nTPM: 140.9
P10809_1015
155.3
P10809_1030
164.0
P10809_1049
163.0
P10809_1068
146.2
P10809_1085
140.9
P10809_1112
188.3
Naive CD8 T-cell nTPM: 148.7
Samples: 6
Max nTPM: 200.9
Min nTPM: 111.3
P10809_1016
143.7
P10809_1031
145.1
P10809_1050
168.7
P10809_1069
122.6
P10809_1087
111.3
P10809_1110
200.9
T-reg nTPM: 114.4
Samples: 6
Max nTPM: 163.6
Min nTPM: 89.0
P10809_1018
102.0
P10809_1037
103.8
P10809_1056
126.6
P10809_1075
89.0
P10809_1094
101.5
P10809_1106
163.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
576.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 458.3
Samples: 4
Max nTPM: 544.7
Min nTPM: 377.3
RHH5202_R3573
447.1
RHH5230_R3602
544.7
RHH5259_R3631
464.1
RHH5288_R3660
377.3
Effector memory CD8 T-cell nTPM: 356.4
Samples: 4
Max nTPM: 369.2
Min nTPM: 325.8
RHH5203_R3574
361.9
RHH5231_R3603
368.5
RHH5260_R3632
325.8
RHH5289_R3661
369.2
MAIT T-cell nTPM: 464.7
Samples: 4
Max nTPM: 504.4
Min nTPM: 421.4
RHH5233_R3605
504.4
RHH5205_R3576
480.6
RHH5262_R3634
452.4
RHH5297_R3663
421.4
Memory CD4 T-cell TFH nTPM: 400.7
Samples: 4
Max nTPM: 423.9
Min nTPM: 365.5
RHH5300_R3666
365.5
RHH5236_R3608
401.6
RHH5265_R3637
423.9
RHH5208_R3579
411.8
Memory CD4 T-cell Th1 nTPM: 475.1
Samples: 4
Max nTPM: 552.8
Min nTPM: 432.8
RHH5210_R3581
458.0
RHH5302_R3668
432.8
RHH5238_R3610
552.8
RHH5267_R3639
456.9
Memory CD4 T-cell Th1/Th17 nTPM: 453.5
Samples: 4
Max nTPM: 590.7
Min nTPM: 334.7
RHH5303_R3669
456.6
RHH5211_R3582
334.7
RHH5239_R3611
590.7
RHH5268_R3640
431.8
Memory CD4 T-cell Th17 nTPM: 463.6
Samples: 4
Max nTPM: 519.7
Min nTPM: 394.7
RHH5304_R3670
519.7
RHH5212_R3583
394.7
RHH5240_R3612
499.5
RHH5269_R3641
440.3
Memory CD4 T-cell Th2 nTPM: 475.6
Samples: 4
Max nTPM: 568.3
Min nTPM: 400.0
RHH5305_R3671
473.7
RHH5213_R3584
400.0
RHH5241_R3613
568.3
RHH5270_R3642
460.5
Naive CD4 T-cell nTPM: 548.5
Samples: 4
Max nTPM: 654.2
Min nTPM: 401.1
RHH5306_R3672
544.7
RHH5214_R3585
401.1
RHH5242_R3614
654.2
RHH5271_R3643
593.9
Naive CD8 T-cell nTPM: 576.1
Samples: 4
Max nTPM: 631.0
Min nTPM: 521.9
RHH5201_R3572
561.4
RHH5229_R3601
631.0
RHH5258_R3630
521.9
RHH5287_R3659
590.0
Non-Vd2 gdTCR nTPM: 336.6
Samples: 4
Max nTPM: 433.1
Min nTPM: 288.8
RHH5235_R3607
433.1
RHH5264_R3636
288.8
RHH5207_R3578
330.2
RHH5299_R3665
294.1
T-reg nTPM: 391.4
Samples: 4
Max nTPM: 420.1
Min nTPM: 345.2
RHH5301_R3667
416.5
RHH5237_R3609
383.8
RHH5266_R3638
420.1
RHH5209_R3580
345.2
Terminal effector memory CD4 T-cell nTPM: 432.7
Samples: 2
Max nTPM: 446.5
Min nTPM: 418.8
RHH5243_R3615
418.8
RHH5272_R3644
446.5
Terminal effector memory CD8 T-cell nTPM: 363.5
Samples: 4
Max nTPM: 452.9
Min nTPM: 265.1
RHH5232_R3604
452.9
RHH5204_R3575
265.1
RHH5261_R3633
360.1
RHH5296_R3662
375.8
Vd2 gdTCR nTPM: 412.0
Samples: 4
Max nTPM: 528.4
Min nTPM: 333.2
RHH5234_R3606
528.4
RHH5206_R3577
333.2
RHH5263_R3635
401.1
RHH5298_R3664
385.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
