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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.1
nTPM
Monaco:
162.3
nTPM
Schmiedel:
278.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.1
HPA sample
nTPM
gdT-cell nTPM: 59.8
Samples: 6
Max nTPM: 81.0
Min nTPM: 41.8
P10809_1007
41.8
P10809_1022
65.9
P10809_1041
81.0
P10809_1060
73.6
P10809_1077
46.3
P10809_1098
50.4
MAIT T-cell nTPM: 55.1
Samples: 6
Max nTPM: 76.1
Min nTPM: 34.2
P10809_1006
54.6
P10809_1024
76.1
P10809_1043
57.9
P10809_1062
53.1
P10809_1083
34.2
P10809_1097
54.9
Memory CD4 T-cell nTPM: 48.9
Samples: 6
Max nTPM: 60.5
Min nTPM: 41.5
P10809_1014
45.9
P10809_1026
54.3
P10809_1045
60.5
P10809_1064
46.1
P10809_1086
45.2
P10809_1113
41.5
Memory CD8 T-cell nTPM: 64.1
Samples: 5
Max nTPM: 82.9
Min nTPM: 46.9
P10809_1012
66.7
P10809_1027
82.9
P10809_1046
58.1
P10809_1065
65.9
P10809_1111
46.9
Naive CD4 T-cell nTPM: 29.0
Samples: 6
Max nTPM: 37.1
Min nTPM: 23.0
P10809_1015
23.0
P10809_1030
35.4
P10809_1049
24.0
P10809_1068
28.6
P10809_1085
37.1
P10809_1112
25.9
Naive CD8 T-cell nTPM: 37.1
Samples: 6
Max nTPM: 48.3
Min nTPM: 27.4
P10809_1016
27.4
P10809_1031
42.5
P10809_1050
43.3
P10809_1069
32.0
P10809_1087
48.3
P10809_1110
28.9
T-reg nTPM: 64.1
Samples: 6
Max nTPM: 69.0
Min nTPM: 57.3
P10809_1018
59.1
P10809_1037
69.0
P10809_1056
62.6
P10809_1075
57.3
P10809_1094
68.9
P10809_1106
67.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
162.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 132.7
Samples: 4
Max nTPM: 172.3
Min nTPM: 99.4
RHH5202_R3573
143.8
RHH5230_R3602
172.3
RHH5259_R3631
99.4
RHH5288_R3660
115.1
Effector memory CD8 T-cell nTPM: 162.3
Samples: 4
Max nTPM: 192.3
Min nTPM: 145.9
RHH5203_R3574
150.3
RHH5231_R3603
160.7
RHH5260_R3632
192.3
RHH5289_R3661
145.9
MAIT T-cell nTPM: 105.2
Samples: 4
Max nTPM: 126.2
Min nTPM: 77.9
RHH5233_R3605
126.2
RHH5205_R3576
117.2
RHH5262_R3634
99.4
RHH5297_R3663
77.9
Memory CD4 T-cell TFH nTPM: 119.8
Samples: 4
Max nTPM: 151.5
Min nTPM: 92.6
RHH5300_R3666
92.6
RHH5236_R3608
127.3
RHH5265_R3637
107.6
RHH5208_R3579
151.5
Memory CD4 T-cell Th1 nTPM: 116.1
Samples: 4
Max nTPM: 172.6
Min nTPM: 73.6
RHH5210_R3581
73.6
RHH5302_R3668
93.4
RHH5238_R3610
172.6
RHH5267_R3639
124.8
Memory CD4 T-cell Th1/Th17 nTPM: 122.5
Samples: 4
Max nTPM: 140.8
Min nTPM: 102.0
RHH5303_R3669
102.0
RHH5211_R3582
132.0
RHH5239_R3611
140.8
RHH5268_R3640
115.0
Memory CD4 T-cell Th17 nTPM: 145.4
Samples: 4
Max nTPM: 220.1
Min nTPM: 113.9
RHH5304_R3670
121.5
RHH5212_R3583
125.9
RHH5240_R3612
220.1
RHH5269_R3641
113.9
Memory CD4 T-cell Th2 nTPM: 125.4
Samples: 4
Max nTPM: 152.6
Min nTPM: 107.0
RHH5305_R3671
116.8
RHH5213_R3584
125.2
RHH5241_R3613
152.6
RHH5270_R3642
107.0
Naive CD4 T-cell nTPM: 51.4
Samples: 4
Max nTPM: 68.3
Min nTPM: 41.3
RHH5306_R3672
41.3
RHH5214_R3585
50.6
RHH5242_R3614
68.3
RHH5271_R3643
45.5
Naive CD8 T-cell nTPM: 63.4
Samples: 4
Max nTPM: 79.3
Min nTPM: 53.4
RHH5201_R3572
64.8
RHH5229_R3601
79.3
RHH5258_R3630
56.0
RHH5287_R3659
53.4
Non-Vd2 gdTCR nTPM: 134.2
Samples: 4
Max nTPM: 158.8
Min nTPM: 93.9
RHH5235_R3607
158.8
RHH5264_R3636
142.9
RHH5207_R3578
141.3
RHH5299_R3665
93.9
T-reg nTPM: 117.5
Samples: 4
Max nTPM: 145.9
Min nTPM: 106.8
RHH5301_R3667
106.8
RHH5237_R3609
145.9
RHH5266_R3638
107.1
RHH5209_R3580
110.2
Terminal effector memory CD4 T-cell nTPM: 157.7
Samples: 2
Max nTPM: 198.7
Min nTPM: 116.6
RHH5243_R3615
198.7
RHH5272_R3644
116.6
Terminal effector memory CD8 T-cell nTPM: 153.2
Samples: 4
Max nTPM: 166.5
Min nTPM: 137.9
RHH5232_R3604
166.5
RHH5204_R3575
143.8
RHH5261_R3633
164.7
RHH5296_R3662
137.9
Vd2 gdTCR nTPM: 138.1
Samples: 4
Max nTPM: 170.9
Min nTPM: 103.0
RHH5234_R3606
136.3
RHH5206_R3577
142.2
RHH5263_R3635
170.9
RHH5298_R3664
103.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
