HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:59.9 nTPM
HPA Brain:144.0 nTPM
GTEx:59.9 nTPM
FANTOM5:149.8 Scaled Tags Per Million
Pig:134.4 nTPM
Mouse:30.2 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004184Antibody HPA063840
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 144.0
Sample id Sample description nTPM
Hippocampus
nTPM: 129.2
1911 Female, age 85, right hemisphere 142.0
2148 Female, age 91, left hemisphere 139.6
2621 Female, age 67, right hemisphere 133.5
2529 Female, age 94, left hemisphere 131.8
1898 Male, age 80, left hemisphere 115.6
1855 Male, age 76, left hemisphere 113.1
Dentate gyrus
nTPM: 131.0
1927 Female, age 91, both hemispheres 140.6
2246 Female, age 85, both hemispheres 140.3
2531 Female, age 67, both hemispheres 139.7
2530 Female, age 94, left hemisphere 137.3
2010 Male, age 76, both hemispheres 127.2
2528 Male, age 74, both hemispheres 100.9
Entorhinal gyrus
nTPM: 131.0
2764 Male, age 80, right hemisphere 151.3
2117 Female, age 91, right hemisphere 142.9
2686 Male, age 75, right hemisphere 142.8
1938 Female, age 85, left hemisphere 119.9
2613 Female, age 94, left hemisphere 114.7
1787 Male, age 76, left hemisphere 114.5
Hippocampus, CA1
nTPM: 144.0
2749 Male, age 80, left hemisphere 200.5
1873 Female, age 85, both hemispheres 148.8
2045 Male, age 76, both hemispheres 140.2
2082 Female, age 91, right hemisphere 117.0
2527 Male, age 74, both hemispheres 113.8
Hippocampus, CA2
nTPM: 128.5
1963 Male, age 80, left hemisphere 169.4
1940 Female, age 85, left hemisphere 134.0
1892 Male, age 76, both hemispheres 127.7
2113 Female, age 91, right hemisphere 121.9
2437 Female, age 94, left hemisphere 110.3
2249 Male, age 74, both hemispheres 107.5
Hippocampus, CA3
nTPM: 123.4
2137 Male, age 80, left hemisphere 146.0
1891 Female, age 85, both hemispheres 144.5
2620 Female, age 94, left hemisphere 136.9
1867 Male, age 76, both hemispheres 124.0
2861 Female, age 67, both hemispheres 112.7
2436 Male, age 74, both hemispheres 76.6
Parahippocampal cortex
nTPM: 124.4
2532 Female, age 72, left hemisphere 141.9
1850 Male, age 80, both hemispheres 140.4
1933 Female, age 85, both hemispheres 140.4
2245 Female, age 91, both hemispheres 140.1
2018 Male, age 76, both hemispheres 131.7
1990 Female, age 91, right hemisphere 121.7
2693 Female, age 94, both hemispheres 119.3
2692 Male, age 74, both hemispheres 116.2
2250 Female, age 67, right hemisphere 97.4
2622 Female, age 67, right hemisphere 95.0
Perirhinal gyrus
nTPM: 124.4
1794 Male, age 80, right hemisphere 138.1
2521 Female, age 94, right hemisphere 136.8
1841 Female, age 85, right hemisphere 118.2
1847 Female, age 91, left hemisphere 116.7
2848 Male, age 76, right hemisphere 112.2
Subiculum
nTPM: 134.9
1901 Male, age 80, both hemispheres 170.0
2042 Male, age 76, both hemispheres 161.8
1977 Female, age 85, both hemispheres 134.1
2438 Female, age 94, left hemisphere 130.6
2729 Female, age 91, right hemisphere 114.1
2619 Male, age 74, both hemispheres 99.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.9
Samples: 197

Max nTPM: 145.8
Min nTPM: 12.5
Std nTPM: 22.7
Median nTPM: 53.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 145.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 143.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 134.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 124.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 120.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 119.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 114.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 114.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 112.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 110.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 105.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 149.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.8
FF:10169-103B7 60 years, female 169.2
FF:10153-102I9 76 years, female 130.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 134.4
Pig sample Sample description nTPM
Subiculum
nTPM: 114.9
Samples: 4

Max nTPM: 127.6
Min nTPM: 102.2
Sample A Female 127.6
Sample B Female 116.8
Sample C Male 102.2
Sample D Male 112.8
Dorsal hippocampus
nTPM: 134.4
Samples: 4

Max nTPM: 154.5
Min nTPM: 123.0
Sample A Female 154.5
Sample B Female 127.0
Sample C Male 133.2
Sample D Male 123.0
Entorhinal cortex
nTPM: 118.8
Samples: 4

Max nTPM: 119.9
Min nTPM: 117.5
Sample A Female 117.5
Sample B Female 119.0
Sample C Male 119.9
Sample D Male 118.6
Ventral hippocampus
nTPM: 110.6
Samples: 4

Max nTPM: 141.7
Min nTPM: 99.3
Sample A Female 101.0
Sample B Female 99.3
Sample C Male 100.4
Sample D Male 141.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 30.3
Min nTPM: 24.3
Sample A Male 30.3
Sample B Male 24.3
Sample C Female 27.4
Sample D Female 24.4
Hippocampal formation
nTPM: 30.2
Samples: 4

Max nTPM: 32.2
Min nTPM: 26.7
Sample A Male 26.7
Sample B Male 32.2
Sample C Female 31.3
Sample D Female 30.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
69407534 Antisense, RP_050414_01_H02, Mouse strain C57BL/6J (56 days, male) 9.3
71249084 Antisense, RP_050414_01_H02, Mouse strain C57BL/6J (56 days, male) 5.0

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