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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.2
nTPM
Monaco:
136.4
nTPM
Schmiedel:
182.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.2
HPA sample
nTPM
gdT-cell nTPM: 25.9
Samples: 6
Max nTPM: 38.3
Min nTPM: 19.7
P10809_1007
23.6
P10809_1022
19.7
P10809_1041
38.3
P10809_1060
25.5
P10809_1077
24.5
P10809_1098
23.8
MAIT T-cell nTPM: 16.5
Samples: 6
Max nTPM: 22.6
Min nTPM: 8.3
P10809_1006
16.4
P10809_1024
13.1
P10809_1043
22.6
P10809_1062
18.6
P10809_1083
8.3
P10809_1097
20.0
Memory CD4 T-cell nTPM: 9.2
Samples: 6
Max nTPM: 12.6
Min nTPM: 4.7
P10809_1014
6.4
P10809_1026
4.7
P10809_1045
12.1
P10809_1064
12.6
P10809_1086
10.2
P10809_1113
9.2
Memory CD8 T-cell nTPM: 22.7
Samples: 5
Max nTPM: 35.4
Min nTPM: 17.4
P10809_1012
23.6
P10809_1027
17.4
P10809_1046
35.4
P10809_1065
18.0
P10809_1111
19.0
Naive CD4 T-cell nTPM: 7.2
Samples: 6
Max nTPM: 11.4
Min nTPM: 4.3
P10809_1015
4.6
P10809_1030
4.3
P10809_1049
11.3
P10809_1068
6.5
P10809_1085
11.4
P10809_1112
5.2
Naive CD8 T-cell nTPM: 27.2
Samples: 6
Max nTPM: 38.4
Min nTPM: 18.3
P10809_1016
21.6
P10809_1031
29.2
P10809_1050
32.0
P10809_1069
38.4
P10809_1087
18.3
P10809_1110
23.6
T-reg nTPM: 13.2
Samples: 6
Max nTPM: 27.7
Min nTPM: 6.9
P10809_1018
10.8
P10809_1037
6.9
P10809_1056
27.7
P10809_1075
13.5
P10809_1094
7.4
P10809_1106
12.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.9
Samples: 4
Max nTPM: 78.1
Min nTPM: 38.5
RHH5202_R3573
62.9
RHH5230_R3602
52.1
RHH5259_R3631
38.5
RHH5288_R3660
78.1
Effector memory CD8 T-cell nTPM: 78.5
Samples: 4
Max nTPM: 123.3
Min nTPM: 50.9
RHH5203_R3574
50.9
RHH5231_R3603
123.3
RHH5260_R3632
72.4
RHH5289_R3661
67.4
MAIT T-cell nTPM: 78.1
Samples: 4
Max nTPM: 91.1
Min nTPM: 61.6
RHH5233_R3605
91.1
RHH5205_R3576
61.6
RHH5262_R3634
80.1
RHH5297_R3663
79.4
Memory CD4 T-cell TFH nTPM: 32.7
Samples: 4
Max nTPM: 41.6
Min nTPM: 17.3
RHH5300_R3666
34.0
RHH5236_R3608
38.0
RHH5265_R3637
41.6
RHH5208_R3579
17.3
Memory CD4 T-cell Th1 nTPM: 40.8
Samples: 4
Max nTPM: 50.2
Min nTPM: 33.9
RHH5210_R3581
42.1
RHH5302_R3668
36.8
RHH5238_R3610
33.9
RHH5267_R3639
50.2
Memory CD4 T-cell Th1/Th17 nTPM: 44.0
Samples: 4
Max nTPM: 50.8
Min nTPM: 30.8
RHH5303_R3669
50.2
RHH5211_R3582
44.2
RHH5239_R3611
30.8
RHH5268_R3640
50.8
Memory CD4 T-cell Th17 nTPM: 43.3
Samples: 4
Max nTPM: 57.5
Min nTPM: 33.2
RHH5304_R3670
49.1
RHH5212_R3583
33.2
RHH5240_R3612
33.3
RHH5269_R3641
57.5
Memory CD4 T-cell Th2 nTPM: 40.7
Samples: 4
Max nTPM: 50.5
Min nTPM: 25.1
RHH5305_R3671
43.4
RHH5213_R3584
43.9
RHH5241_R3613
25.1
RHH5270_R3642
50.5
Naive CD4 T-cell nTPM: 47.5
Samples: 4
Max nTPM: 60.6
Min nTPM: 40.1
RHH5306_R3672
60.6
RHH5214_R3585
40.1
RHH5242_R3614
46.3
RHH5271_R3643
43.0
Naive CD8 T-cell nTPM: 118.2
Samples: 4
Max nTPM: 154.5
Min nTPM: 100.7
RHH5201_R3572
154.5
RHH5229_R3601
114.9
RHH5258_R3630
102.6
RHH5287_R3659
100.7
Non-Vd2 gdTCR nTPM: 115.0
Samples: 4
Max nTPM: 128.1
Min nTPM: 103.2
RHH5235_R3607
104.1
RHH5264_R3636
124.4
RHH5207_R3578
103.2
RHH5299_R3665
128.1
T-reg nTPM: 51.5
Samples: 4
Max nTPM: 60.4
Min nTPM: 35.3
RHH5301_R3667
58.2
RHH5237_R3609
52.2
RHH5266_R3638
60.4
RHH5209_R3580
35.3
Terminal effector memory CD4 T-cell nTPM: 136.5
Samples: 2
Max nTPM: 143.3
Min nTPM: 129.6
RHH5243_R3615
129.6
RHH5272_R3644
143.3
Terminal effector memory CD8 T-cell nTPM: 121.3
Samples: 4
Max nTPM: 135.6
Min nTPM: 98.9
RHH5232_R3604
125.5
RHH5204_R3575
98.9
RHH5261_R3633
135.6
RHH5296_R3662
125.3
Vd2 gdTCR nTPM: 94.0
Samples: 4
Max nTPM: 123.5
Min nTPM: 78.3
RHH5234_R3606
78.3
RHH5206_R3577
123.5
RHH5263_R3635
85.5
RHH5298_R3664
88.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
