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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
186.3
nTPM
Monaco:
369.0
nTPM
Schmiedel:
77.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
186.3
HPA sample
nTPM
gdT-cell nTPM: 45.2
Samples: 6
Max nTPM: 65.4
Min nTPM: 29.2
P10809_1007
39.1
P10809_1022
40.7
P10809_1041
61.3
P10809_1060
29.2
P10809_1077
35.3
P10809_1098
65.4
MAIT T-cell nTPM: 186.3
Samples: 6
Max nTPM: 299.5
Min nTPM: 114.1
P10809_1006
158.9
P10809_1024
180.8
P10809_1043
223.3
P10809_1062
141.4
P10809_1083
114.1
P10809_1097
299.5
Memory CD4 T-cell nTPM: 75.9
Samples: 6
Max nTPM: 104.1
Min nTPM: 47.9
P10809_1014
79.8
P10809_1026
92.5
P10809_1045
69.4
P10809_1064
47.9
P10809_1086
61.9
P10809_1113
104.1
Memory CD8 T-cell nTPM: 78.3
Samples: 5
Max nTPM: 110.9
Min nTPM: 46.3
P10809_1012
86.2
P10809_1027
60.3
P10809_1046
88.0
P10809_1065
46.3
P10809_1111
110.9
Naive CD4 T-cell nTPM: 26.7
Samples: 6
Max nTPM: 31.5
Min nTPM: 21.4
P10809_1015
27.2
P10809_1030
26.4
P10809_1049
31.5
P10809_1068
26.3
P10809_1085
21.4
P10809_1112
27.6
Naive CD8 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 56.3
Min nTPM: 26.3
P10809_1016
44.5
P10809_1031
45.7
P10809_1050
39.0
P10809_1069
28.6
P10809_1087
26.3
P10809_1110
56.3
T-reg nTPM: 155.9
Samples: 6
Max nTPM: 215.9
Min nTPM: 108.9
P10809_1018
108.9
P10809_1037
115.1
P10809_1056
140.4
P10809_1075
146.7
P10809_1094
215.9
P10809_1106
208.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
369.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 194.7
Samples: 4
Max nTPM: 298.0
Min nTPM: 114.9
RHH5202_R3573
223.7
RHH5230_R3602
298.0
RHH5259_R3631
114.9
RHH5288_R3660
142.2
Effector memory CD8 T-cell nTPM: 133.6
Samples: 4
Max nTPM: 163.5
Min nTPM: 105.0
RHH5203_R3574
122.3
RHH5231_R3603
143.7
RHH5260_R3632
105.0
RHH5289_R3661
163.5
MAIT T-cell nTPM: 369.0
Samples: 4
Max nTPM: 497.7
Min nTPM: 292.7
RHH5233_R3605
373.0
RHH5205_R3576
497.7
RHH5262_R3634
312.4
RHH5297_R3663
292.7
Memory CD4 T-cell TFH nTPM: 175.0
Samples: 4
Max nTPM: 235.2
Min nTPM: 144.9
RHH5300_R3666
144.9
RHH5236_R3608
235.2
RHH5265_R3637
150.6
RHH5208_R3579
169.2
Memory CD4 T-cell Th1 nTPM: 107.7
Samples: 4
Max nTPM: 123.9
Min nTPM: 90.8
RHH5210_R3581
90.8
RHH5302_R3668
123.9
RHH5238_R3610
114.6
RHH5267_R3639
101.3
Memory CD4 T-cell Th1/Th17 nTPM: 150.3
Samples: 4
Max nTPM: 207.8
Min nTPM: 108.1
RHH5303_R3669
157.0
RHH5211_R3582
207.8
RHH5239_R3611
108.1
RHH5268_R3640
128.4
Memory CD4 T-cell Th17 nTPM: 206.2
Samples: 4
Max nTPM: 237.2
Min nTPM: 176.2
RHH5304_R3670
205.2
RHH5212_R3583
206.3
RHH5240_R3612
237.2
RHH5269_R3641
176.2
Memory CD4 T-cell Th2 nTPM: 197.2
Samples: 4
Max nTPM: 227.4
Min nTPM: 161.1
RHH5305_R3671
183.3
RHH5213_R3584
216.9
RHH5241_R3613
227.4
RHH5270_R3642
161.1
Naive CD4 T-cell nTPM: 72.3
Samples: 4
Max nTPM: 91.2
Min nTPM: 44.0
RHH5306_R3672
70.3
RHH5214_R3585
83.6
RHH5242_R3614
91.2
RHH5271_R3643
44.0
Naive CD8 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 116.6
Min nTPM: 100.4
RHH5201_R3572
116.6
RHH5229_R3601
103.6
RHH5258_R3630
100.4
RHH5287_R3659
110.6
Non-Vd2 gdTCR nTPM: 130.3
Samples: 4
Max nTPM: 172.9
Min nTPM: 85.6
RHH5235_R3607
172.9
RHH5264_R3636
121.2
RHH5207_R3578
141.4
RHH5299_R3665
85.6
T-reg nTPM: 147.3
Samples: 4
Max nTPM: 222.4
Min nTPM: 106.4
RHH5301_R3667
124.6
RHH5237_R3609
222.4
RHH5266_R3638
106.4
RHH5209_R3580
135.8
Terminal effector memory CD4 T-cell nTPM: 78.0
Samples: 2
Max nTPM: 78.0
Min nTPM: 77.9
RHH5243_R3615
78.0
RHH5272_R3644
77.9
Terminal effector memory CD8 T-cell nTPM: 112.2
Samples: 4
Max nTPM: 123.4
Min nTPM: 93.4
RHH5232_R3604
121.2
RHH5204_R3575
93.4
RHH5261_R3633
110.9
RHH5296_R3662
123.4
Vd2 gdTCR nTPM: 142.4
Samples: 4
Max nTPM: 209.9
Min nTPM: 106.5
RHH5234_R3606
209.9
RHH5206_R3577
113.5
RHH5263_R3635
106.5
RHH5298_R3664
139.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
