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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
394.0
nTPM
Monaco:
1190.0
nTPM
Schmiedel:
438.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
394.0
HPA sample
nTPM
gdT-cell nTPM: 243.5
Samples: 6
Max nTPM: 303.4
Min nTPM: 194.1
P10809_1007
215.5
P10809_1022
272.7
P10809_1041
303.4
P10809_1060
194.1
P10809_1077
209.4
P10809_1098
266.0
MAIT T-cell nTPM: 394.0
Samples: 6
Max nTPM: 456.0
Min nTPM: 349.0
P10809_1006
456.0
P10809_1024
385.3
P10809_1043
397.9
P10809_1062
375.1
P10809_1083
349.0
P10809_1097
400.9
Memory CD4 T-cell nTPM: 302.3
Samples: 6
Max nTPM: 362.4
Min nTPM: 228.1
P10809_1014
362.4
P10809_1026
307.5
P10809_1045
317.8
P10809_1064
228.1
P10809_1086
275.3
P10809_1113
322.5
Memory CD8 T-cell nTPM: 324.0
Samples: 5
Max nTPM: 404.6
Min nTPM: 200.9
P10809_1012
404.6
P10809_1027
295.6
P10809_1046
380.3
P10809_1065
200.9
P10809_1111
338.7
Naive CD4 T-cell nTPM: 250.6
Samples: 6
Max nTPM: 317.4
Min nTPM: 185.1
P10809_1015
300.1
P10809_1030
218.7
P10809_1049
185.1
P10809_1068
243.2
P10809_1085
239.2
P10809_1112
317.4
Naive CD8 T-cell nTPM: 252.7
Samples: 6
Max nTPM: 325.2
Min nTPM: 204.3
P10809_1016
325.2
P10809_1031
255.0
P10809_1050
236.0
P10809_1069
219.3
P10809_1087
204.3
P10809_1110
276.3
T-reg nTPM: 348.0
Samples: 6
Max nTPM: 439.1
Min nTPM: 274.2
P10809_1018
439.1
P10809_1037
335.7
P10809_1056
313.8
P10809_1075
274.2
P10809_1094
398.4
P10809_1106
326.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1190.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1101.8
Samples: 4
Max nTPM: 1299.6
Min nTPM: 996.3
RHH5202_R3573
1086.4
RHH5230_R3602
1299.6
RHH5259_R3631
996.3
RHH5288_R3660
1024.8
Effector memory CD8 T-cell nTPM: 1028.9
Samples: 4
Max nTPM: 1191.5
Min nTPM: 818.3
RHH5203_R3574
1191.5
RHH5231_R3603
818.3
RHH5260_R3632
1034.8
RHH5289_R3661
1070.9
MAIT T-cell nTPM: 1190.0
Samples: 4
Max nTPM: 1410.9
Min nTPM: 964.6
RHH5233_R3605
1080.2
RHH5205_R3576
1410.9
RHH5262_R3634
1304.4
RHH5297_R3663
964.6
Memory CD4 T-cell TFH nTPM: 1071.8
Samples: 4
Max nTPM: 1272.6
Min nTPM: 887.5
RHH5300_R3666
887.5
RHH5236_R3608
929.0
RHH5265_R3637
1197.9
RHH5208_R3579
1272.6
Memory CD4 T-cell Th1 nTPM: 1076.6
Samples: 4
Max nTPM: 1292.0
Min nTPM: 943.8
RHH5210_R3581
979.3
RHH5302_R3668
1091.2
RHH5238_R3610
943.8
RHH5267_R3639
1292.0
Memory CD4 T-cell Th1/Th17 nTPM: 983.8
Samples: 4
Max nTPM: 1109.0
Min nTPM: 800.8
RHH5303_R3669
1033.8
RHH5211_R3582
1109.0
RHH5239_R3611
800.8
RHH5268_R3640
991.6
Memory CD4 T-cell Th17 nTPM: 937.9
Samples: 4
Max nTPM: 1008.4
Min nTPM: 874.2
RHH5304_R3670
992.3
RHH5212_R3583
876.5
RHH5240_R3612
1008.4
RHH5269_R3641
874.2
Memory CD4 T-cell Th2 nTPM: 915.1
Samples: 4
Max nTPM: 992.1
Min nTPM: 831.9
RHH5305_R3671
940.4
RHH5213_R3584
895.9
RHH5241_R3613
831.9
RHH5270_R3642
992.1
Naive CD4 T-cell nTPM: 857.2
Samples: 4
Max nTPM: 896.7
Min nTPM: 832.7
RHH5306_R3672
832.7
RHH5214_R3585
854.4
RHH5242_R3614
844.9
RHH5271_R3643
896.7
Naive CD8 T-cell nTPM: 880.7
Samples: 4
Max nTPM: 992.8
Min nTPM: 801.7
RHH5201_R3572
992.8
RHH5229_R3601
801.7
RHH5258_R3630
848.8
RHH5287_R3659
879.5
Non-Vd2 gdTCR nTPM: 555.4
Samples: 4
Max nTPM: 583.5
Min nTPM: 522.1
RHH5235_R3607
583.5
RHH5264_R3636
561.4
RHH5207_R3578
522.1
RHH5299_R3665
554.4
T-reg nTPM: 732.2
Samples: 4
Max nTPM: 772.8
Min nTPM: 639.7
RHH5301_R3667
759.2
RHH5237_R3609
772.8
RHH5266_R3638
757.2
RHH5209_R3580
639.7
Terminal effector memory CD4 T-cell nTPM: 591.1
Samples: 2
Max nTPM: 607.6
Min nTPM: 574.6
RHH5243_R3615
574.6
RHH5272_R3644
607.6
Terminal effector memory CD8 T-cell nTPM: 613.9
Samples: 4
Max nTPM: 745.3
Min nTPM: 512.9
RHH5232_R3604
600.8
RHH5204_R3575
512.9
RHH5261_R3633
596.6
RHH5296_R3662
745.3
Vd2 gdTCR nTPM: 1032.4
Samples: 4
Max nTPM: 1226.9
Min nTPM: 719.6
RHH5234_R3606
1184.6
RHH5206_R3577
719.6
RHH5263_R3635
1226.9
RHH5298_R3664
998.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.