HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:14.9 nTPM
HPA Brain:20.3 nTPM
GTEx:14.9 nTPM
FANTOM5:9.8 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:24.1 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050193Antibody HPA050200
Glial cells MediumNot detected
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.5
2529 Female, age 94, left hemisphere 20.2
1855 Male, age 76, left hemisphere 19.3
1898 Male, age 80, left hemisphere 19.3
2148 Female, age 91, left hemisphere 18.8
1911 Female, age 85, right hemisphere 17.0
2621 Female, age 67, right hemisphere 16.3
Dentate gyrus
nTPM: 19.2
2528 Male, age 74, both hemispheres 21.5
2530 Female, age 94, left hemisphere 21.2
2010 Male, age 76, both hemispheres 20.1
1927 Female, age 91, both hemispheres 19.9
2531 Female, age 67, both hemispheres 16.2
2246 Female, age 85, both hemispheres 16.1
Entorhinal gyrus
nTPM: 20.3
2764 Male, age 80, right hemisphere 22.5
2613 Female, age 94, left hemisphere 22.0
1938 Female, age 85, left hemisphere 20.9
2117 Female, age 91, right hemisphere 20.9
1787 Male, age 76, left hemisphere 20.4
2686 Male, age 75, right hemisphere 15.4
Hippocampus, CA1
nTPM: 19.4
2749 Male, age 80, left hemisphere 22.7
2527 Male, age 74, both hemispheres 19.8
1873 Female, age 85, both hemispheres 18.8
2082 Female, age 91, right hemisphere 18.1
2045 Male, age 76, both hemispheres 17.6
Hippocampus, CA2
nTPM: 20.2
1963 Male, age 80, left hemisphere 21.8
1892 Male, age 76, both hemispheres 21.6
2437 Female, age 94, left hemisphere 21.4
2249 Male, age 74, both hemispheres 21.0
2113 Female, age 91, right hemisphere 18.1
1940 Female, age 85, left hemisphere 17.2
Hippocampus, CA3
nTPM: 18.0
2137 Male, age 80, left hemisphere 19.3
2436 Male, age 74, both hemispheres 19.1
2620 Female, age 94, left hemisphere 18.6
1867 Male, age 76, both hemispheres 18.4
2861 Female, age 67, both hemispheres 16.6
1891 Female, age 85, both hemispheres 16.0
Parahippocampal cortex
nTPM: 18.2
1990 Female, age 91, right hemisphere 22.4
2245 Female, age 91, both hemispheres 19.1
1933 Female, age 85, both hemispheres 19.0
2018 Male, age 76, both hemispheres 18.4
2250 Female, age 67, right hemisphere 17.9
2532 Female, age 72, left hemisphere 17.5
2693 Female, age 94, both hemispheres 17.3
1850 Male, age 80, both hemispheres 17.2
2622 Female, age 67, right hemisphere 17.1
2692 Male, age 74, both hemispheres 16.1
Perirhinal gyrus
nTPM: 18.6
1794 Male, age 80, right hemisphere 20.5
1847 Female, age 91, left hemisphere 20.5
2521 Female, age 94, right hemisphere 19.0
1841 Female, age 85, right hemisphere 17.6
2848 Male, age 76, right hemisphere 15.4
Subiculum
nTPM: 17.8
2619 Male, age 74, both hemispheres 20.6
1977 Female, age 85, both hemispheres 20.1
2729 Female, age 91, right hemisphere 19.8
2042 Male, age 76, both hemispheres 18.3
1901 Male, age 80, both hemispheres 16.7
2438 Female, age 94, left hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 25.9
Min nTPM: 4.3
Std nTPM: 4.3
Median nTPM: 14.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 25.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 25.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 25.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 24.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 24.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 24.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 22.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 22.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.8
FF:10153-102I9 76 years, female 13.4
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 14.2
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.5
Sample A Female 19.5
Sample B Female 13.2
Sample C Male 12.7
Sample D Male 11.5
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 23.7
Min nTPM: 15.5
Sample A Female 23.7
Sample B Female 16.0
Sample C Male 16.3
Sample D Male 15.5
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.3
Min nTPM: 12.0
Sample A Female 15.3
Sample B Female 13.5
Sample C Male 14.9
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 11.2
Sample A Female 16.0
Sample B Female 11.2
Sample C Male 18.2
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 24.0
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 22.6
Sample C Female 24.0
Sample D Female 23.7
Hippocampal formation
nTPM: 24.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 23.5
Sample A Male 23.5
Sample B Male 23.6
Sample C Female 23.7
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
1552 Antisense, RP_Baylor_103362, Mouse strain C57BL/6J (56 days, male) 1.6
1551 Antisense, RP_Baylor_103362, Mouse strain C57BL/6J (56 days, male) 0.5

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