We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.3
nTPM
Monaco:
44.7
nTPM
Schmiedel:
28.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.3
HPA sample
nTPM
gdT-cell nTPM: 53.5
Samples: 6
Max nTPM: 71.1
Min nTPM: 29.7
P10809_1007
29.7
P10809_1022
58.2
P10809_1041
67.2
P10809_1060
49.3
P10809_1077
45.3
P10809_1098
71.1
MAIT T-cell nTPM: 52.9
Samples: 6
Max nTPM: 72.1
Min nTPM: 23.5
P10809_1006
23.5
P10809_1024
52.4
P10809_1043
72.1
P10809_1062
64.8
P10809_1083
43.2
P10809_1097
61.1
Memory CD4 T-cell nTPM: 53.9
Samples: 6
Max nTPM: 72.8
Min nTPM: 32.8
P10809_1014
32.8
P10809_1026
60.3
P10809_1045
72.8
P10809_1064
55.7
P10809_1086
37.6
P10809_1113
64.1
Memory CD8 T-cell nTPM: 58.0
Samples: 5
Max nTPM: 85.0
Min nTPM: 40.4
P10809_1012
40.4
P10809_1027
61.7
P10809_1046
85.0
P10809_1065
41.7
P10809_1111
61.2
Naive CD4 T-cell nTPM: 53.4
Samples: 6
Max nTPM: 86.5
Min nTPM: 26.7
P10809_1015
26.7
P10809_1030
48.1
P10809_1049
86.5
P10809_1068
50.4
P10809_1085
32.7
P10809_1112
75.8
Naive CD8 T-cell nTPM: 48.6
Samples: 6
Max nTPM: 64.3
Min nTPM: 29.8
P10809_1016
29.8
P10809_1031
64.3
P10809_1050
53.0
P10809_1069
46.3
P10809_1087
36.8
P10809_1110
61.1
T-reg nTPM: 65.3
Samples: 6
Max nTPM: 117.1
Min nTPM: 33.8
P10809_1018
33.8
P10809_1037
55.3
P10809_1056
117.1
P10809_1075
69.6
P10809_1094
44.8
P10809_1106
71.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.2
Samples: 4
Max nTPM: 43.9
Min nTPM: 19.3
RHH5202_R3573
43.9
RHH5230_R3602
40.8
RHH5259_R3631
19.3
RHH5288_R3660
32.8
Effector memory CD8 T-cell nTPM: 44.5
Samples: 4
Max nTPM: 62.9
Min nTPM: 35.4
RHH5203_R3574
62.9
RHH5231_R3603
39.4
RHH5260_R3632
35.4
RHH5289_R3661
40.3
MAIT T-cell nTPM: 43.5
Samples: 4
Max nTPM: 48.6
Min nTPM: 37.5
RHH5233_R3605
45.9
RHH5205_R3576
37.5
RHH5262_R3634
48.6
RHH5297_R3663
42.0
Memory CD4 T-cell TFH nTPM: 36.1
Samples: 4
Max nTPM: 41.6
Min nTPM: 29.7
RHH5300_R3666
37.1
RHH5236_R3608
41.6
RHH5265_R3637
35.9
RHH5208_R3579
29.7
Memory CD4 T-cell Th1 nTPM: 30.1
Samples: 4
Max nTPM: 40.4
Min nTPM: 23.7
RHH5210_R3581
40.4
RHH5302_R3668
31.8
RHH5238_R3610
23.7
RHH5267_R3639
24.4
Memory CD4 T-cell Th1/Th17 nTPM: 35.5
Samples: 4
Max nTPM: 62.8
Min nTPM: 13.1
RHH5303_R3669
35.6
RHH5211_R3582
62.8
RHH5239_R3611
13.1
RHH5268_R3640
30.3
Memory CD4 T-cell Th17 nTPM: 34.4
Samples: 4
Max nTPM: 42.7
Min nTPM: 26.7
RHH5304_R3670
27.5
RHH5212_R3583
40.6
RHH5240_R3612
42.7
RHH5269_R3641
26.7
Memory CD4 T-cell Th2 nTPM: 43.5
Samples: 4
Max nTPM: 56.4
Min nTPM: 33.1
RHH5305_R3671
43.4
RHH5213_R3584
56.4
RHH5241_R3613
33.1
RHH5270_R3642
41.1
Naive CD4 T-cell nTPM: 38.3
Samples: 4
Max nTPM: 50.5
Min nTPM: 24.0
RHH5306_R3672
33.1
RHH5214_R3585
50.5
RHH5242_R3614
24.0
RHH5271_R3643
45.7
Naive CD8 T-cell nTPM: 29.2
Samples: 4
Max nTPM: 39.9
Min nTPM: 19.0
RHH5201_R3572
20.7
RHH5229_R3601
19.0
RHH5258_R3630
37.3
RHH5287_R3659
39.9
Non-Vd2 gdTCR nTPM: 44.7
Samples: 4
Max nTPM: 53.6
Min nTPM: 31.8
RHH5235_R3607
31.8
RHH5264_R3636
51.5
RHH5207_R3578
41.9
RHH5299_R3665
53.6
T-reg nTPM: 44.5
Samples: 4
Max nTPM: 56.8
Min nTPM: 31.5
RHH5301_R3667
42.0
RHH5237_R3609
56.8
RHH5266_R3638
31.5
RHH5209_R3580
47.7
Terminal effector memory CD4 T-cell nTPM: 36.7
Samples: 2
Max nTPM: 38.5
Min nTPM: 34.8
RHH5243_R3615
38.5
RHH5272_R3644
34.8
Terminal effector memory CD8 T-cell nTPM: 35.4
Samples: 4
Max nTPM: 46.5
Min nTPM: 23.2
RHH5232_R3604
39.5
RHH5204_R3575
32.5
RHH5261_R3633
23.2
RHH5296_R3662
46.5
Vd2 gdTCR nTPM: 41.8
Samples: 4
Max nTPM: 62.6
Min nTPM: 31.1
RHH5234_R3606
32.2
RHH5206_R3577
62.6
RHH5263_R3635
41.2
RHH5298_R3664
31.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
