We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.0
nTPM
Monaco:
834.9
nTPM
Schmiedel:
622.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.0
HPA sample
nTPM
gdT-cell nTPM: 18.5
Samples: 6
Max nTPM: 26.6
Min nTPM: 7.6
P10809_1007
18.6
P10809_1022
21.8
P10809_1041
26.6
P10809_1060
23.7
P10809_1077
12.5
P10809_1098
7.6
MAIT T-cell nTPM: 35.5
Samples: 6
Max nTPM: 55.2
Min nTPM: 18.9
P10809_1006
39.8
P10809_1024
55.2
P10809_1043
39.3
P10809_1062
35.5
P10809_1083
18.9
P10809_1097
24.4
Memory CD4 T-cell nTPM: 70.8
Samples: 6
Max nTPM: 97.4
Min nTPM: 46.2
P10809_1014
97.4
P10809_1026
73.4
P10809_1045
92.6
P10809_1064
52.9
P10809_1086
46.2
P10809_1113
62.0
Memory CD8 T-cell nTPM: 33.0
Samples: 5
Max nTPM: 50.8
Min nTPM: 19.3
P10809_1012
50.8
P10809_1027
29.6
P10809_1046
34.1
P10809_1065
19.3
P10809_1111
31.1
Naive CD4 T-cell nTPM: 87.0
Samples: 6
Max nTPM: 102.7
Min nTPM: 57.6
P10809_1015
102.7
P10809_1030
81.4
P10809_1049
97.6
P10809_1068
99.6
P10809_1085
57.6
P10809_1112
82.9
Naive CD8 T-cell nTPM: 51.5
Samples: 6
Max nTPM: 86.8
Min nTPM: 15.4
P10809_1016
86.8
P10809_1031
52.9
P10809_1050
47.2
P10809_1069
43.4
P10809_1087
15.4
P10809_1110
63.3
T-reg nTPM: 86.9
Samples: 6
Max nTPM: 112.8
Min nTPM: 59.4
P10809_1018
112.8
P10809_1037
78.2
P10809_1056
103.0
P10809_1075
59.4
P10809_1094
87.3
P10809_1106
80.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
834.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 646.0
Samples: 4
Max nTPM: 714.4
Min nTPM: 559.5
RHH5202_R3573
655.4
RHH5230_R3602
654.7
RHH5259_R3631
714.4
RHH5288_R3660
559.5
Effector memory CD8 T-cell nTPM: 270.6
Samples: 4
Max nTPM: 337.5
Min nTPM: 221.7
RHH5203_R3574
290.2
RHH5231_R3603
221.7
RHH5260_R3632
337.5
RHH5289_R3661
232.8
MAIT T-cell nTPM: 280.1
Samples: 4
Max nTPM: 325.7
Min nTPM: 224.2
RHH5233_R3605
325.7
RHH5205_R3576
304.2
RHH5262_R3634
266.2
RHH5297_R3663
224.2
Memory CD4 T-cell TFH nTPM: 821.9
Samples: 4
Max nTPM: 903.4
Min nTPM: 754.9
RHH5300_R3666
754.9
RHH5236_R3608
903.4
RHH5265_R3637
856.9
RHH5208_R3579
772.3
Memory CD4 T-cell Th1 nTPM: 682.4
Samples: 4
Max nTPM: 766.6
Min nTPM: 627.1
RHH5210_R3581
696.6
RHH5302_R3668
627.1
RHH5238_R3610
766.6
RHH5267_R3639
639.2
Memory CD4 T-cell Th1/Th17 nTPM: 659.9
Samples: 4
Max nTPM: 835.1
Min nTPM: 538.1
RHH5303_R3669
538.1
RHH5211_R3582
671.1
RHH5239_R3611
835.1
RHH5268_R3640
595.2
Memory CD4 T-cell Th17 nTPM: 745.0
Samples: 4
Max nTPM: 1085.9
Min nTPM: 611.6
RHH5304_R3670
611.6
RHH5212_R3583
641.6
RHH5240_R3612
1085.9
RHH5269_R3641
640.7
Memory CD4 T-cell Th2 nTPM: 666.3
Samples: 4
Max nTPM: 760.3
Min nTPM: 626.9
RHH5305_R3671
642.5
RHH5213_R3584
635.4
RHH5241_R3613
760.3
RHH5270_R3642
626.9
Naive CD4 T-cell nTPM: 835.0
Samples: 4
Max nTPM: 955.1
Min nTPM: 687.2
RHH5306_R3672
792.7
RHH5214_R3585
687.2
RHH5242_R3614
904.8
RHH5271_R3643
955.1
Naive CD8 T-cell nTPM: 729.4
Samples: 4
Max nTPM: 909.8
Min nTPM: 641.0
RHH5201_R3572
672.8
RHH5229_R3601
909.8
RHH5258_R3630
641.0
RHH5287_R3659
694.0
Non-Vd2 gdTCR nTPM: 176.0
Samples: 4
Max nTPM: 215.9
Min nTPM: 130.5
RHH5235_R3607
215.9
RHH5264_R3636
201.6
RHH5207_R3578
130.5
RHH5299_R3665
155.8
T-reg nTPM: 677.7
Samples: 4
Max nTPM: 739.8
Min nTPM: 605.3
RHH5301_R3667
605.3
RHH5237_R3609
739.8
RHH5266_R3638
717.6
RHH5209_R3580
648.2
Terminal effector memory CD4 T-cell nTPM: 216.6
Samples: 2
Max nTPM: 284.8
Min nTPM: 148.4
RHH5243_R3615
148.4
RHH5272_R3644
284.8
Terminal effector memory CD8 T-cell nTPM: 148.1
Samples: 4
Max nTPM: 163.5
Min nTPM: 121.2
RHH5232_R3604
160.2
RHH5204_R3575
121.2
RHH5261_R3633
163.5
RHH5296_R3662
147.5
Vd2 gdTCR nTPM: 244.2
Samples: 4
Max nTPM: 340.5
Min nTPM: 155.0
RHH5234_R3606
259.9
RHH5206_R3577
155.0
RHH5263_R3635
340.5
RHH5298_R3664
221.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
