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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
202.9
nTPM
Monaco:
399.3
nTPM
Schmiedel:
396.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
202.9
HPA sample
nTPM
gdT-cell nTPM: 111.0
Samples: 6
Max nTPM: 129.7
Min nTPM: 89.8
P10809_1007
109.2
P10809_1022
129.7
P10809_1041
112.1
P10809_1060
107.1
P10809_1077
89.8
P10809_1098
117.8
MAIT T-cell nTPM: 202.9
Samples: 6
Max nTPM: 255.1
Min nTPM: 168.9
P10809_1006
255.1
P10809_1024
239.7
P10809_1043
175.4
P10809_1062
192.7
P10809_1083
168.9
P10809_1097
185.5
Memory CD4 T-cell nTPM: 137.5
Samples: 6
Max nTPM: 156.0
Min nTPM: 99.9
P10809_1014
154.8
P10809_1026
153.2
P10809_1045
156.0
P10809_1064
99.9
P10809_1086
112.8
P10809_1113
148.1
Memory CD8 T-cell nTPM: 132.0
Samples: 5
Max nTPM: 151.2
Min nTPM: 107.7
P10809_1012
151.2
P10809_1027
135.3
P10809_1046
137.6
P10809_1065
107.7
P10809_1111
128.3
Naive CD4 T-cell nTPM: 127.0
Samples: 6
Max nTPM: 148.2
Min nTPM: 109.4
P10809_1015
148.2
P10809_1030
118.6
P10809_1049
117.0
P10809_1068
136.3
P10809_1085
109.4
P10809_1112
132.3
Naive CD8 T-cell nTPM: 117.5
Samples: 6
Max nTPM: 149.9
Min nTPM: 97.0
P10809_1016
149.9
P10809_1031
110.9
P10809_1050
110.7
P10809_1069
104.6
P10809_1087
97.0
P10809_1110
131.8
T-reg nTPM: 155.9
Samples: 6
Max nTPM: 171.0
Min nTPM: 136.0
P10809_1018
165.6
P10809_1037
168.4
P10809_1056
136.0
P10809_1075
144.1
P10809_1094
171.0
P10809_1106
150.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
399.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 286.6
Samples: 4
Max nTPM: 362.1
Min nTPM: 223.2
RHH5202_R3573
337.8
RHH5230_R3602
362.1
RHH5259_R3631
223.2
RHH5288_R3660
223.4
Effector memory CD8 T-cell nTPM: 277.7
Samples: 4
Max nTPM: 342.7
Min nTPM: 230.8
RHH5203_R3574
342.7
RHH5231_R3603
259.3
RHH5260_R3632
230.8
RHH5289_R3661
277.9
MAIT T-cell nTPM: 399.4
Samples: 4
Max nTPM: 459.0
Min nTPM: 287.6
RHH5233_R3605
429.7
RHH5205_R3576
459.0
RHH5262_R3634
421.1
RHH5297_R3663
287.6
Memory CD4 T-cell TFH nTPM: 220.8
Samples: 4
Max nTPM: 253.8
Min nTPM: 187.6
RHH5300_R3666
200.2
RHH5236_R3608
187.6
RHH5265_R3637
241.5
RHH5208_R3579
253.8
Memory CD4 T-cell Th1 nTPM: 271.4
Samples: 4
Max nTPM: 301.5
Min nTPM: 249.1
RHH5210_R3581
255.7
RHH5302_R3668
249.1
RHH5238_R3610
279.1
RHH5267_R3639
301.5
Memory CD4 T-cell Th1/Th17 nTPM: 328.2
Samples: 4
Max nTPM: 375.8
Min nTPM: 299.3
RHH5303_R3669
315.7
RHH5211_R3582
375.8
RHH5239_R3611
321.8
RHH5268_R3640
299.3
Memory CD4 T-cell Th17 nTPM: 308.3
Samples: 4
Max nTPM: 347.7
Min nTPM: 275.9
RHH5304_R3670
311.6
RHH5212_R3583
275.9
RHH5240_R3612
347.7
RHH5269_R3641
297.9
Memory CD4 T-cell Th2 nTPM: 306.3
Samples: 4
Max nTPM: 361.3
Min nTPM: 283.9
RHH5305_R3671
283.9
RHH5213_R3584
290.7
RHH5241_R3613
361.3
RHH5270_R3642
289.1
Naive CD4 T-cell nTPM: 249.9
Samples: 4
Max nTPM: 270.5
Min nTPM: 235.4
RHH5306_R3672
244.8
RHH5214_R3585
235.4
RHH5242_R3614
270.5
RHH5271_R3643
248.8
Naive CD8 T-cell nTPM: 258.5
Samples: 4
Max nTPM: 313.7
Min nTPM: 211.2
RHH5201_R3572
313.7
RHH5229_R3601
211.2
RHH5258_R3630
257.1
RHH5287_R3659
252.1
Non-Vd2 gdTCR nTPM: 242.4
Samples: 4
Max nTPM: 295.6
Min nTPM: 191.9
RHH5235_R3607
295.6
RHH5264_R3636
219.0
RHH5207_R3578
263.1
RHH5299_R3665
191.9
T-reg nTPM: 220.0
Samples: 4
Max nTPM: 280.1
Min nTPM: 174.7
RHH5301_R3667
174.7
RHH5237_R3609
194.3
RHH5266_R3638
280.1
RHH5209_R3580
230.8
Terminal effector memory CD4 T-cell nTPM: 216.9
Samples: 2
Max nTPM: 254.3
Min nTPM: 179.4
RHH5243_R3615
254.3
RHH5272_R3644
179.4
Terminal effector memory CD8 T-cell nTPM: 228.8
Samples: 4
Max nTPM: 267.6
Min nTPM: 205.8
RHH5232_R3604
267.6
RHH5204_R3575
205.8
RHH5261_R3633
228.9
RHH5296_R3662
212.8
Vd2 gdTCR nTPM: 323.5
Samples: 4
Max nTPM: 379.9
Min nTPM: 261.0
RHH5234_R3606
367.1
RHH5206_R3577
286.0
RHH5263_R3635
379.9
RHH5298_R3664
261.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.