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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
301.8
nTPM
Monaco:
75.1
nTPM
Schmiedel:
110.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.8
HPA sample
nTPM
gdT-cell nTPM: 156.7
Samples: 6
Max nTPM: 199.3
Min nTPM: 138.5
P10809_1007
138.5
P10809_1022
144.6
P10809_1041
199.3
P10809_1060
144.6
P10809_1077
159.3
P10809_1098
153.8
MAIT T-cell nTPM: 162.8
Samples: 6
Max nTPM: 199.8
Min nTPM: 130.2
P10809_1006
130.2
P10809_1024
168.2
P10809_1043
199.8
P10809_1062
169.9
P10809_1083
169.0
P10809_1097
139.6
Memory CD4 T-cell nTPM: 216.2
Samples: 6
Max nTPM: 262.2
Min nTPM: 168.7
P10809_1014
208.3
P10809_1026
262.2
P10809_1045
168.7
P10809_1064
214.4
P10809_1086
224.5
P10809_1113
219.0
Memory CD8 T-cell nTPM: 177.0
Samples: 5
Max nTPM: 191.8
Min nTPM: 152.3
P10809_1012
183.9
P10809_1027
186.7
P10809_1046
152.3
P10809_1065
191.8
P10809_1111
170.2
Naive CD4 T-cell nTPM: 183.0
Samples: 6
Max nTPM: 207.5
Min nTPM: 161.0
P10809_1015
179.8
P10809_1030
197.0
P10809_1049
161.0
P10809_1068
207.5
P10809_1085
170.6
P10809_1112
181.8
Naive CD8 T-cell nTPM: 182.5
Samples: 6
Max nTPM: 222.9
Min nTPM: 147.4
P10809_1016
200.9
P10809_1031
189.4
P10809_1050
147.4
P10809_1069
222.9
P10809_1087
181.8
P10809_1110
152.8
T-reg nTPM: 301.8
Samples: 6
Max nTPM: 316.0
Min nTPM: 284.2
P10809_1018
292.7
P10809_1037
312.8
P10809_1056
284.2
P10809_1075
305.1
P10809_1094
316.0
P10809_1106
299.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.3
Samples: 4
Max nTPM: 87.9
Min nTPM: 31.1
RHH5202_R3573
87.9
RHH5230_R3602
31.1
RHH5259_R3631
50.6
RHH5288_R3660
51.7
Effector memory CD8 T-cell nTPM: 53.0
Samples: 4
Max nTPM: 66.9
Min nTPM: 27.6
RHH5203_R3574
66.9
RHH5231_R3603
27.6
RHH5260_R3632
56.0
RHH5289_R3661
61.3
MAIT T-cell nTPM: 47.3
Samples: 4
Max nTPM: 85.0
Min nTPM: 11.4
RHH5233_R3605
11.4
RHH5205_R3576
85.0
RHH5262_R3634
51.8
RHH5297_R3663
40.9
Memory CD4 T-cell TFH nTPM: 54.4
Samples: 4
Max nTPM: 86.4
Min nTPM: 31.9
RHH5300_R3666
50.6
RHH5236_R3608
31.9
RHH5265_R3637
48.8
RHH5208_R3579
86.4
Memory CD4 T-cell Th1 nTPM: 63.3
Samples: 4
Max nTPM: 88.8
Min nTPM: 48.1
RHH5210_R3581
88.8
RHH5302_R3668
48.1
RHH5238_R3610
63.0
RHH5267_R3639
53.2
Memory CD4 T-cell Th1/Th17 nTPM: 63.9
Samples: 4
Max nTPM: 97.2
Min nTPM: 36.3
RHH5303_R3669
63.9
RHH5211_R3582
97.2
RHH5239_R3611
36.3
RHH5268_R3640
58.2
Memory CD4 T-cell Th17 nTPM: 56.9
Samples: 4
Max nTPM: 86.2
Min nTPM: 25.1
RHH5304_R3670
59.1
RHH5212_R3583
86.2
RHH5240_R3612
25.1
RHH5269_R3641
57.2
Memory CD4 T-cell Th2 nTPM: 54.0
Samples: 4
Max nTPM: 84.4
Min nTPM: 19.1
RHH5305_R3671
46.7
RHH5213_R3584
84.4
RHH5241_R3613
19.1
RHH5270_R3642
65.6
Naive CD4 T-cell nTPM: 65.4
Samples: 4
Max nTPM: 112.5
Min nTPM: 31.4
RHH5306_R3672
49.1
RHH5214_R3585
112.5
RHH5242_R3614
31.4
RHH5271_R3643
68.6
Naive CD8 T-cell nTPM: 75.1
Samples: 4
Max nTPM: 133.8
Min nTPM: 30.7
RHH5201_R3572
133.8
RHH5229_R3601
30.7
RHH5258_R3630
54.1
RHH5287_R3659
81.9
Non-Vd2 gdTCR nTPM: 47.4
Samples: 4
Max nTPM: 75.7
Min nTPM: 26.7
RHH5235_R3607
26.7
RHH5264_R3636
44.3
RHH5207_R3578
75.7
RHH5299_R3665
42.8
T-reg nTPM: 62.1
Samples: 4
Max nTPM: 111.5
Min nTPM: 38.2
RHH5301_R3667
41.8
RHH5237_R3609
38.2
RHH5266_R3638
56.7
RHH5209_R3580
111.5
Terminal effector memory CD4 T-cell nTPM: 36.7
Samples: 2
Max nTPM: 46.0
Min nTPM: 27.4
RHH5243_R3615
27.4
RHH5272_R3644
46.0
Terminal effector memory CD8 T-cell nTPM: 54.0
Samples: 4
Max nTPM: 90.1
Min nTPM: 29.9
RHH5232_R3604
29.9
RHH5204_R3575
90.1
RHH5261_R3633
50.3
RHH5296_R3662
45.6
Vd2 gdTCR nTPM: 50.4
Samples: 4
Max nTPM: 93.6
Min nTPM: 28.3
RHH5234_R3606
28.3
RHH5206_R3577
93.6
RHH5263_R3635
45.8
RHH5298_R3664
33.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
