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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.8
nTPM
Monaco:
133.1
nTPM
Schmiedel:
269.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.8
HPA sample
nTPM
gdT-cell nTPM: 44.8
Samples: 6
Max nTPM: 51.9
Min nTPM: 38.8
P10809_1007
43.6
P10809_1022
48.6
P10809_1041
38.8
P10809_1060
40.6
P10809_1077
45.3
P10809_1098
51.9
MAIT T-cell nTPM: 55.8
Samples: 6
Max nTPM: 71.0
Min nTPM: 36.6
P10809_1006
62.9
P10809_1024
61.7
P10809_1043
36.6
P10809_1062
50.5
P10809_1083
52.3
P10809_1097
71.0
Memory CD4 T-cell nTPM: 55.0
Samples: 6
Max nTPM: 65.0
Min nTPM: 44.8
P10809_1014
65.0
P10809_1026
44.8
P10809_1045
51.0
P10809_1064
56.6
P10809_1086
54.1
P10809_1113
58.2
Memory CD8 T-cell nTPM: 57.4
Samples: 5
Max nTPM: 74.7
Min nTPM: 43.9
P10809_1012
56.6
P10809_1027
74.7
P10809_1046
46.8
P10809_1065
43.9
P10809_1111
64.8
Naive CD4 T-cell nTPM: 50.6
Samples: 6
Max nTPM: 66.1
Min nTPM: 38.8
P10809_1015
66.1
P10809_1030
63.6
P10809_1049
42.8
P10809_1068
38.8
P10809_1085
50.2
P10809_1112
42.2
Naive CD8 T-cell nTPM: 54.1
Samples: 6
Max nTPM: 63.5
Min nTPM: 48.5
P10809_1016
52.3
P10809_1031
59.7
P10809_1050
48.5
P10809_1069
51.3
P10809_1087
63.5
P10809_1110
49.3
T-reg nTPM: 66.8
Samples: 6
Max nTPM: 78.7
Min nTPM: 52.5
P10809_1018
78.7
P10809_1037
58.2
P10809_1056
72.1
P10809_1075
68.8
P10809_1094
52.5
P10809_1106
70.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.6
Samples: 4
Max nTPM: 123.4
Min nTPM: 99.0
RHH5202_R3573
123.4
RHH5230_R3602
102.6
RHH5259_R3631
101.2
RHH5288_R3660
99.0
Effector memory CD8 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 139.3
Min nTPM: 102.0
RHH5203_R3574
139.3
RHH5231_R3603
102.0
RHH5260_R3632
129.1
RHH5289_R3661
127.6
MAIT T-cell nTPM: 105.0
Samples: 4
Max nTPM: 129.2
Min nTPM: 82.0
RHH5233_R3605
97.2
RHH5205_R3576
129.2
RHH5262_R3634
111.5
RHH5297_R3663
82.0
Memory CD4 T-cell TFH nTPM: 105.8
Samples: 4
Max nTPM: 120.9
Min nTPM: 69.1
RHH5300_R3666
69.1
RHH5236_R3608
120.9
RHH5265_R3637
112.2
RHH5208_R3579
120.8
Memory CD4 T-cell Th1 nTPM: 83.5
Samples: 4
Max nTPM: 95.6
Min nTPM: 76.3
RHH5210_R3581
95.6
RHH5302_R3668
80.4
RHH5238_R3610
76.3
RHH5267_R3639
81.5
Memory CD4 T-cell Th1/Th17 nTPM: 117.4
Samples: 4
Max nTPM: 165.5
Min nTPM: 88.4
RHH5303_R3669
97.2
RHH5211_R3582
165.5
RHH5239_R3611
88.4
RHH5268_R3640
118.4
Memory CD4 T-cell Th17 nTPM: 133.1
Samples: 4
Max nTPM: 198.9
Min nTPM: 90.7
RHH5304_R3670
125.4
RHH5212_R3583
117.4
RHH5240_R3612
198.9
RHH5269_R3641
90.7
Memory CD4 T-cell Th2 nTPM: 122.3
Samples: 4
Max nTPM: 180.8
Min nTPM: 100.4
RHH5305_R3671
100.4
RHH5213_R3584
180.8
RHH5241_R3613
104.4
RHH5270_R3642
103.4
Naive CD4 T-cell nTPM: 95.1
Samples: 4
Max nTPM: 104.5
Min nTPM: 80.3
RHH5306_R3672
80.3
RHH5214_R3585
104.5
RHH5242_R3614
96.4
RHH5271_R3643
99.2
Naive CD8 T-cell nTPM: 119.6
Samples: 4
Max nTPM: 164.2
Min nTPM: 84.9
RHH5201_R3572
120.6
RHH5229_R3601
164.2
RHH5258_R3630
108.7
RHH5287_R3659
84.9
Non-Vd2 gdTCR nTPM: 99.5
Samples: 4
Max nTPM: 118.2
Min nTPM: 65.4
RHH5235_R3607
115.4
RHH5264_R3636
118.2
RHH5207_R3578
99.1
RHH5299_R3665
65.4
T-reg nTPM: 98.4
Samples: 4
Max nTPM: 125.2
Min nTPM: 70.1
RHH5301_R3667
70.1
RHH5237_R3609
99.5
RHH5266_R3638
98.7
RHH5209_R3580
125.2
Terminal effector memory CD4 T-cell nTPM: 103.9
Samples: 2
Max nTPM: 112.2
Min nTPM: 95.5
RHH5243_R3615
112.2
RHH5272_R3644
95.5
Terminal effector memory CD8 T-cell nTPM: 99.4
Samples: 4
Max nTPM: 118.3
Min nTPM: 81.0
RHH5232_R3604
103.9
RHH5204_R3575
94.4
RHH5261_R3633
118.3
RHH5296_R3662
81.0
Vd2 gdTCR nTPM: 114.1
Samples: 4
Max nTPM: 165.0
Min nTPM: 79.5
RHH5234_R3606
97.8
RHH5206_R3577
113.9
RHH5263_R3635
165.0
RHH5298_R3664
79.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
