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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.8
nTPM
Monaco:
151.2
nTPM
Schmiedel:
239.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.8
HPA sample
nTPM
gdT-cell nTPM: 23.1
Samples: 6
Max nTPM: 25.2
Min nTPM: 18.9
P10809_1007
23.5
P10809_1022
23.0
P10809_1041
18.9
P10809_1060
25.1
P10809_1077
25.2
P10809_1098
22.9
MAIT T-cell nTPM: 17.9
Samples: 6
Max nTPM: 25.1
Min nTPM: 11.4
P10809_1006
25.1
P10809_1024
15.7
P10809_1043
15.8
P10809_1062
18.4
P10809_1083
11.4
P10809_1097
21.1
Memory CD4 T-cell nTPM: 24.5
Samples: 6
Max nTPM: 27.4
Min nTPM: 21.3
P10809_1014
25.6
P10809_1026
21.3
P10809_1045
23.7
P10809_1064
23.2
P10809_1086
25.8
P10809_1113
27.4
Memory CD8 T-cell nTPM: 24.4
Samples: 5
Max nTPM: 28.5
Min nTPM: 21.8
P10809_1012
23.7
P10809_1027
28.5
P10809_1046
21.8
P10809_1065
25.7
P10809_1111
22.4
Naive CD4 T-cell nTPM: 19.2
Samples: 6
Max nTPM: 22.4
Min nTPM: 16.0
P10809_1015
21.0
P10809_1030
16.3
P10809_1049
19.7
P10809_1068
19.6
P10809_1085
16.0
P10809_1112
22.4
Naive CD8 T-cell nTPM: 17.9
Samples: 6
Max nTPM: 20.4
Min nTPM: 15.0
P10809_1016
15.0
P10809_1031
19.6
P10809_1050
15.0
P10809_1069
19.3
P10809_1087
20.4
P10809_1110
18.1
T-reg nTPM: 39.8
Samples: 6
Max nTPM: 52.7
Min nTPM: 28.1
P10809_1018
40.5
P10809_1037
50.8
P10809_1056
36.2
P10809_1075
28.1
P10809_1094
30.4
P10809_1106
52.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
151.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 114.0
Samples: 4
Max nTPM: 128.6
Min nTPM: 103.9
RHH5202_R3573
107.6
RHH5230_R3602
128.6
RHH5259_R3631
116.0
RHH5288_R3660
103.9
Effector memory CD8 T-cell nTPM: 137.5
Samples: 4
Max nTPM: 163.6
Min nTPM: 108.3
RHH5203_R3574
138.1
RHH5231_R3603
140.1
RHH5260_R3632
163.6
RHH5289_R3661
108.3
MAIT T-cell nTPM: 97.1
Samples: 4
Max nTPM: 120.0
Min nTPM: 80.1
RHH5233_R3605
94.3
RHH5205_R3576
120.0
RHH5262_R3634
93.9
RHH5297_R3663
80.1
Memory CD4 T-cell TFH nTPM: 141.3
Samples: 4
Max nTPM: 178.1
Min nTPM: 106.5
RHH5300_R3666
146.4
RHH5236_R3608
106.5
RHH5265_R3637
178.1
RHH5208_R3579
134.2
Memory CD4 T-cell Th1 nTPM: 130.1
Samples: 4
Max nTPM: 135.6
Min nTPM: 115.2
RHH5210_R3581
135.0
RHH5302_R3668
115.2
RHH5238_R3610
134.7
RHH5267_R3639
135.6
Memory CD4 T-cell Th1/Th17 nTPM: 123.2
Samples: 4
Max nTPM: 157.5
Min nTPM: 90.6
RHH5303_R3669
90.6
RHH5211_R3582
141.0
RHH5239_R3611
157.5
RHH5268_R3640
103.5
Memory CD4 T-cell Th17 nTPM: 151.2
Samples: 4
Max nTPM: 194.1
Min nTPM: 119.2
RHH5304_R3670
119.2
RHH5212_R3583
133.6
RHH5240_R3612
194.1
RHH5269_R3641
157.8
Memory CD4 T-cell Th2 nTPM: 127.0
Samples: 4
Max nTPM: 138.2
Min nTPM: 112.0
RHH5305_R3671
112.0
RHH5213_R3584
132.5
RHH5241_R3613
125.1
RHH5270_R3642
138.2
Naive CD4 T-cell nTPM: 118.0
Samples: 4
Max nTPM: 147.4
Min nTPM: 87.0
RHH5306_R3672
109.4
RHH5214_R3585
87.0
RHH5242_R3614
147.4
RHH5271_R3643
128.3
Naive CD8 T-cell nTPM: 104.2
Samples: 4
Max nTPM: 120.6
Min nTPM: 89.1
RHH5201_R3572
98.8
RHH5229_R3601
120.6
RHH5258_R3630
108.4
RHH5287_R3659
89.1
Non-Vd2 gdTCR nTPM: 143.7
Samples: 4
Max nTPM: 174.8
Min nTPM: 111.8
RHH5235_R3607
158.5
RHH5264_R3636
129.8
RHH5207_R3578
174.8
RHH5299_R3665
111.8
T-reg nTPM: 132.8
Samples: 4
Max nTPM: 143.7
Min nTPM: 121.7
RHH5301_R3667
121.7
RHH5237_R3609
126.5
RHH5266_R3638
143.7
RHH5209_R3580
139.1
Terminal effector memory CD4 T-cell nTPM: 144.5
Samples: 2
Max nTPM: 151.8
Min nTPM: 137.1
RHH5243_R3615
137.1
RHH5272_R3644
151.8
Terminal effector memory CD8 T-cell nTPM: 144.3
Samples: 4
Max nTPM: 160.6
Min nTPM: 119.3
RHH5232_R3604
158.9
RHH5204_R3575
138.3
RHH5261_R3633
160.6
RHH5296_R3662
119.3
Vd2 gdTCR nTPM: 101.1
Samples: 4
Max nTPM: 118.8
Min nTPM: 88.2
RHH5234_R3606
100.3
RHH5206_R3577
88.2
RHH5263_R3635
118.8
RHH5298_R3664
96.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
