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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
106.6
nTPM
Monaco:
323.8
nTPM
Schmiedel:
452.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.6
HPA sample
nTPM
gdT-cell nTPM: 100.5
Samples: 6
Max nTPM: 128.1
Min nTPM: 76.6
P10809_1007
99.4
P10809_1022
128.1
P10809_1041
99.9
P10809_1060
76.6
P10809_1077
100.3
P10809_1098
98.5
MAIT T-cell nTPM: 97.9
Samples: 6
Max nTPM: 114.2
Min nTPM: 88.4
P10809_1006
109.8
P10809_1024
114.2
P10809_1043
89.5
P10809_1062
88.4
P10809_1083
92.3
P10809_1097
93.1
Memory CD4 T-cell nTPM: 79.6
Samples: 6
Max nTPM: 96.0
Min nTPM: 67.5
P10809_1014
72.8
P10809_1026
77.8
P10809_1045
74.0
P10809_1064
96.0
P10809_1086
89.6
P10809_1113
67.5
Memory CD8 T-cell nTPM: 85.0
Samples: 5
Max nTPM: 99.6
Min nTPM: 71.4
P10809_1012
88.1
P10809_1027
71.4
P10809_1046
91.0
P10809_1065
99.6
P10809_1111
75.0
Naive CD4 T-cell nTPM: 106.0
Samples: 6
Max nTPM: 109.9
Min nTPM: 98.5
P10809_1015
109.9
P10809_1030
108.3
P10809_1049
105.1
P10809_1068
105.9
P10809_1085
108.5
P10809_1112
98.5
Naive CD8 T-cell nTPM: 106.6
Samples: 6
Max nTPM: 132.5
Min nTPM: 90.7
P10809_1016
112.1
P10809_1031
90.7
P10809_1050
98.1
P10809_1069
132.5
P10809_1087
103.0
P10809_1110
103.0
T-reg nTPM: 78.2
Samples: 6
Max nTPM: 87.1
Min nTPM: 65.0
P10809_1018
71.0
P10809_1037
81.8
P10809_1056
65.0
P10809_1075
78.1
P10809_1094
86.4
P10809_1106
87.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
323.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 238.4
Samples: 4
Max nTPM: 253.1
Min nTPM: 222.6
RHH5202_R3573
243.1
RHH5230_R3602
253.1
RHH5259_R3631
234.7
RHH5288_R3660
222.6
Effector memory CD8 T-cell nTPM: 272.3
Samples: 4
Max nTPM: 294.6
Min nTPM: 261.9
RHH5203_R3574
261.9
RHH5231_R3603
269.6
RHH5260_R3632
263.1
RHH5289_R3661
294.6
MAIT T-cell nTPM: 271.2
Samples: 4
Max nTPM: 328.2
Min nTPM: 220.3
RHH5233_R3605
290.7
RHH5205_R3576
328.2
RHH5262_R3634
245.7
RHH5297_R3663
220.3
Memory CD4 T-cell TFH nTPM: 228.7
Samples: 4
Max nTPM: 242.6
Min nTPM: 214.5
RHH5300_R3666
235.3
RHH5236_R3608
222.3
RHH5265_R3637
242.6
RHH5208_R3579
214.5
Memory CD4 T-cell Th1 nTPM: 250.6
Samples: 4
Max nTPM: 311.5
Min nTPM: 203.4
RHH5210_R3581
203.4
RHH5302_R3668
216.0
RHH5238_R3610
311.5
RHH5267_R3639
271.6
Memory CD4 T-cell Th1/Th17 nTPM: 232.9
Samples: 4
Max nTPM: 291.7
Min nTPM: 181.1
RHH5303_R3669
218.1
RHH5211_R3582
291.7
RHH5239_R3611
240.8
RHH5268_R3640
181.1
Memory CD4 T-cell Th17 nTPM: 255.1
Samples: 4
Max nTPM: 271.9
Min nTPM: 239.7
RHH5304_R3670
268.4
RHH5212_R3583
239.7
RHH5240_R3612
271.9
RHH5269_R3641
240.5
Memory CD4 T-cell Th2 nTPM: 183.7
Samples: 4
Max nTPM: 201.9
Min nTPM: 162.2
RHH5305_R3671
162.2
RHH5213_R3584
187.2
RHH5241_R3613
201.9
RHH5270_R3642
183.3
Naive CD4 T-cell nTPM: 248.5
Samples: 4
Max nTPM: 290.6
Min nTPM: 212.6
RHH5306_R3672
212.6
RHH5214_R3585
224.5
RHH5242_R3614
266.2
RHH5271_R3643
290.6
Naive CD8 T-cell nTPM: 323.8
Samples: 4
Max nTPM: 410.3
Min nTPM: 242.7
RHH5201_R3572
328.5
RHH5229_R3601
410.3
RHH5258_R3630
242.7
RHH5287_R3659
313.7
Non-Vd2 gdTCR nTPM: 230.1
Samples: 4
Max nTPM: 257.4
Min nTPM: 202.9
RHH5235_R3607
211.1
RHH5264_R3636
248.8
RHH5207_R3578
257.4
RHH5299_R3665
202.9
T-reg nTPM: 218.4
Samples: 4
Max nTPM: 257.1
Min nTPM: 169.2
RHH5301_R3667
216.1
RHH5237_R3609
257.1
RHH5266_R3638
169.2
RHH5209_R3580
231.1
Terminal effector memory CD4 T-cell nTPM: 267.1
Samples: 2
Max nTPM: 279.2
Min nTPM: 254.9
RHH5243_R3615
279.2
RHH5272_R3644
254.9
Terminal effector memory CD8 T-cell nTPM: 233.1
Samples: 4
Max nTPM: 256.2
Min nTPM: 193.7
RHH5232_R3604
256.2
RHH5204_R3575
193.7
RHH5261_R3633
243.7
RHH5296_R3662
238.6
Vd2 gdTCR nTPM: 292.9
Samples: 4
Max nTPM: 346.6
Min nTPM: 241.2
RHH5234_R3606
271.4
RHH5206_R3577
312.4
RHH5263_R3635
346.6
RHH5298_R3664
241.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
